Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1188 158 2e-33 seq346 125 1e-23 >seq1188 Length=23189 Score = 158 bits (174), Expect = 2e-33 Identities = 300/436 (69%), Gaps = 23/436 (5%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || |||||||| || ||||| |||||||| || || || || ||||||| Sbjct 4667 CTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTC 4726 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || ||||| | |||||| | || ||||| Sbjct 4727 TGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGT 4786 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 |||||||| || ||| |||||| ||| ||| ||||| || || | | | || ||| Sbjct 4787 GACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCC 4846 Query 125604 GAGTGCAGATCCAGCGATGAAA-AGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 || ||| | || ||| ||||| |||| || ||||| | || || Sbjct 4847 GA-------TCCTAAGGTGGTTCAGGACATCA---TTGTT---GAGGCCGTCGGCATTGA 4893 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAAT 125722 || ||||| || || || | || || | | || |||||||||||| |||||| || Sbjct 4894 GCAGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCAT 4953 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA- 125781 |||||||||||| ||||| || || || || || ||| | | | ||| ||||| Sbjct 4954 GTGCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTG---GTGGCTCTCGGCAACAAGAA 5010 Query 125782 --TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 |||||||| | || ||||| || |||||| ||| || || | || ||||| Sbjct 5011 GTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGAC 5070 Query 125840 CAACTTTTTCGAGAAG 125855 |||||| ||||||||| Sbjct 5071 CAACTTCTTCGAGAAG 5086 >seq346 Length=34350 Score = 125 bits (138), Expect = 1e-23 Identities = 324/487 (67%), Gaps = 10/487 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || |||||| | ||| ||||| |||| || |||||||| || Sbjct 14807 CAGGGTGGTAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 14866 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || |||| || ||| || || |||| || ||| | ||| Sbjct 14867 GTCTTCGAGTTCCTTGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCCGTGAC 14926 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || | ||| || ||| | |||||||||||||| | | |||||| Sbjct 14927 CTCTTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTG-- 14984 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || | || ||| || | | ||||| ||| | ||| || || || ||| Sbjct 14985 -ACTGGACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAG 15043 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || || || ||| || |||||||| |||||||| || |||| | || | || Sbjct 15044 TTCGACGCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACTA-TCAAGGC 15102 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | ||||| | ||||||| |||||||| | || | ||| | Sbjct 15103 TC-AGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGC 15161 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||||| | || || || ||||| || |||| || || ||| Sbjct 15162 TCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCT 15221 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| |||||||| || ||||| |||||| | || || ||| ||| || ||| | Sbjct 15222 CCAACCTGTGCACTGAGATTGTCGAGTACAGTGCCCCTGATGAGGTGGCTGTCTGCAACC 15281 Query 97351 TGGCATC 97357 |||| || Sbjct 15282 TGGCTTC 15288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741043239437480