Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1228 192 9e-45 seq1344 168 1e-37 >seq1228 Length=31262 Score = 192 bits (212), Expect = 9e-45 Identities = 205/268 (76%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || ||||||||||||||||||||||| || | Sbjct 1121 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAAGGAATCACCAAGCCGGCCA 1179 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 1180 TCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 1239 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || |||| |||| ||| ||| || ||| |||| Sbjct 1240 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCTGTCACCTACACCG 1299 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| ||||||||| | || ||||||| || | || || || | Sbjct 1300 AGCACGCCAAGCGTAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 1359 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| | || ||||| || |||| Sbjct 1360 GCCGTACCCTCTACGGTTTCGGTGGTTA 1387 >seq1344 Length=8078 Score = 168 bits (186), Expect = 1e-37 Identities = 189/250 (76%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 3497 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 3555 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 3556 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 3615 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| || ||| || || Sbjct 3616 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 3675 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 3676 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 3735 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 3736 CCGTAAGTTT 3745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073624649039