Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1188 159 3e-34 seq588 109 5e-19 seq1609 107 2e-18 seq244 93.3 4e-14 >seq1188 Length=23189 Score = 159 bits (176), Expect = 3e-34 Identities = 339/500 (68%), Gaps = 7/500 (1%) Strand=Plus/Plus Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157 |||||| || ||||||| | ||||||||| | || | |||||||| ||| Sbjct 4606 CAAGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGAGTCAACTTTCGCTTCGCG 4665 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | |||| ||||| || ||| ||||| |||| || |||||| || ||| ||||||| Sbjct 4666 TCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTT 4725 Query 46218 TTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCG 46277 | | || | ||| | ||||| |||||||| || |||||||||||| || || Sbjct 4726 CTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCG 4785 Query 46278 CGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAA 46337 |||||||| || || || ||||| || ||||| || | | | | | || || || Sbjct 4786 TGACGAGGGTCTCCACACTGACTTCGCCTGTCTG--CTGTT-CTCCCACATGAACCACCG 4842 Query 46338 GCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTT 46397 | | || | || | | ||| | ||||| || | ||||||| ||||||| Sbjct 4843 CCCCGATCCTAAGGTGGTTCAGGACATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTT 4902 Query 46398 TTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTA 46457 |||| | ||| || ||| | ||||| ||||||||| | || |||||||| || Sbjct 4903 CCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCGAGTA 4962 Query 46458 CATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCAGC-CGAAGCATTTTCAC 46515 ||||||||| || || ||||| ||||| ||| ||| || || | |||| | | || Sbjct 4963 CATCGAGTTCGTCGCTGACCGCCTGCTGGTG--GCTCTCGGCAACAAGAAGTACTACAAC 5020 Query 46516 GCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTC 46575 || ||| || || || || ||| | ||||||||||| ||||| || || || ||| Sbjct 5021 GCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTC 5080 Query 46576 GAAAAGCGCGTCGGCGAGTA 46595 || ||||| ||||| || || Sbjct 5081 GAGAAGCGTGTCGGTGACTA 5100 >seq588 Length=1505 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||||||||| ||||| ||||| | |||||| ||||| ||||||||||| Sbjct 175 GTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 234 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | |||||||||||| ||||| || || || ||||| ||| || |||| Sbjct 235 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 294 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | ||||||| ||||||| | || | ||| | |||||| || || Sbjct 295 ACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 347 >seq1609 Length=37815 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| |||||||| || ||| ||| Sbjct 13139 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 13080 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || || || || || || || ||| || ||||| | | Sbjct 13079 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGT 13020 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||||| |||| ||||| ||| ||||| || || || || |||| Sbjct 13019 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 12960 Query 131225 AA 131226 || Sbjct 12959 AA 12958 >seq244 Length=29022 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | |||||||||||| || ||||||||||| Sbjct 25092 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 25033 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 25032 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 24973 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 24972 ATACCCTCCTTGTC 24959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002634024320