Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1398 111 1e-19
>seq1398
Length=71217
Score = 111 bits (122), Expect = 1e-19
Identities = 202/293 (69%), Gaps = 12/293 (4%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | | || | || ||||||||||| ||||| |||||||
Sbjct 39916 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 39859
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314
|||| ||||| | ||||| |||||| || || || | ||| | || ||| |
Sbjct 39858 TTAAGACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCCCTCAGCCGTCCTCCT 39803
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
|||| | | || || ||||| | ||||||||| || ||| | | | | | |
Sbjct 39802 GCCTATCTCATCAAGTACTTCGGATTCGAACTTGGTGCCCAGGCCAATGCTAAGCCCTCC 39743
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| || | ||| ||||||| || || || | ||||||| ||||||| || ||
Sbjct 39742 GACGACCGTTGGATCATTAACGGTTCTCACGACGCCCCCAAGCTTCAGGACTACCTCGAT 39683
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || |||||| ||||| || | | ||| | ||||| ||||||||
Sbjct 39682 GGCTTCATCTCCAAGTTCGTGCTCTGCAAGAAGTGCAAGAACCCCGAGACCGA 39630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334940166422813
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |