Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1188 156 8e-33 seq588 143 5e-29 seq1609 129 1e-24 seq1025 91.5 3e-13 >seq1188 Length=23189 Score = 156 bits (172), Expect = 8e-33 Identities = 298/438 (68%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 5119 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 5060 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 5059 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 5000 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||||||||||| || ||| || | ||||| Sbjct 4999 GAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTT 4940 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || | |||||| | ||||| || ||| |||| || || |||| || Sbjct 4939 CATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGC 4880 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAG---GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || | | |||| || ||||| | | | || | | |||| | | || | Sbjct 4879 CTCAACAATGATGTCCTGAACCACCTTAGGATCGGGGCGGTGGTTC---ATGTGGGAGAA 4823 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 ||| || | || | |||||| |||||||| || ||| | ||||||||| || Sbjct 4822 CAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAA 4763 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 | ||| || ||||| || || || || |||||||| |||| | ||| || || || Sbjct 4762 AGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGA 4703 Query 10352 GAACAGAAGACCCTCCAC 10369 ||| | | |||||| || Sbjct 4702 GAAGAAGATACCCTCGAC 4685 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| | |||| ||| |||||| Sbjct 4373 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAAATGAAG 4314 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||||| |||||||| | ||||||| | ||||| | ||| | | | Sbjct 4313 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 4254 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||| | ||| |||||||||||||||| || Sbjct 4253 TCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTG 4210 >seq588 Length=1505 Score = 143 bits (158), Expect = 5e-29 Identities = 157/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| ||||||||||||||||| || Sbjct 145 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 204 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 205 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 264 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | ||||||| ||||| || || ||| || || || Sbjct 265 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATC-GCTGGACTCAAC 323 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||||||| || |||| Sbjct 324 CTCAAGGGTGATGGTTTTGCCAGTGA 349 >seq1609 Length=37815 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 13137 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 13078 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| ||||| || || ||||| | ||||||| ||| Sbjct 13077 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 13018 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 13017 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 12959 >seq1025 Length=40114 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/208 (72%), Gaps = 14/208 (7%) Strand=Plus/Minus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGT--TCGTC 225493 ||| ||| |||||||||| ||||||||||| || || | ||| || || || Sbjct 12396 GCAGACTTCGTCAAGGAAACCAGAGTCGTGACTGACGATCA-----GACTGGTGATC-TC 12343 Query 225494 AG---GC-CCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTG 225548 || || |||| |||| | | || ||||| ||||| ||||||| |||||| | Sbjct 12342 AGTGTGCGCCTTCAGGTAC-TCCTGCAGCCACTTAACGTTTGCCACGTCCAAGTGGTTAG 12284 Query 225549 TAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCT 225608 ||||||||||||| || || | ||||| | ||| || || || | | || ||||| Sbjct 12283 TAGGTTCGTCCAGCAGGAGCACATCAGCCTTCTGGAGCATAGCACGGGCCAAAGCCAGCT 12224 Query 225609 TCATTTTCCAGCCCCCGGACAGGGAGCC 225636 |||| |||||||| |||||||||||||| Sbjct 12223 TCATCTTCCAGCCACCGGACAGGGAGCC 12196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921602550557560