Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq1609 104 2e-17
seq588 86.0 6e-12
>seq1609
Length=37815
Score = 104 bits (114), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| ||||| ||| |||||
Sbjct 13137 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 13078
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| |||||||| || || || ||||||||||| ||| ||| || ||||| |||| ||
Sbjct 13077 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTG-TC 13019
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 13018 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 12959
Query 127105 A 127105
|
Sbjct 12958 A 12958
>seq588
Length=1505
Score = 86.0 bits (94), Expect = 6e-12
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||| || || ||||| | |||||| ||| || ||||| || |||
Sbjct 175 GTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 234
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || ||||| || |||||||||||| ||| || ||||
Sbjct 235 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 294
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| |||| |||| || || | ||| || || | ||| | |||||||| ||
Sbjct 295 ACGTTG-TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475490558901520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |