Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1609 104 2e-17 seq588 86.0 6e-12 >seq1609 Length=37815 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| ||||| ||| ||||| Sbjct 13137 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 13078 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| || || || ||||||||||| ||| ||| || ||||| |||| || Sbjct 13077 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTG-TC 13019 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 13018 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 12959 Query 127105 A 127105 | Sbjct 12958 A 12958 >seq588 Length=1505 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || || ||||| | |||||| ||| || ||||| || ||| Sbjct 175 GTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 234 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| || |||||||||||| ||| || |||| Sbjct 235 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 294 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| || || | ||| || || | ||| | |||||||| || Sbjct 295 ACGTTG-TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475490558901520