Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq346 187 3e-42 seq1188 131 2e-25 seq1663 100 3e-16 >seq346 Length=34350 Score = 187 bits (206), Expect = 3e-42 Identities = 567/864 (66%), Gaps = 13/864 (2%) Strand=Plus/Minus Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475 ||||| | || ||||||| || ||||| || || |||| |||||| || || Sbjct 15309 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 15250 Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535 ||||| | ||| || || |||| || || || ||| || |||| |||||| || || Sbjct 15249 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 15190 Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595 ||| |||| || ||||||||||||||||| | || | || ||||| || || | | Sbjct 15189 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 15130 Query 116596 TTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC 116654 | |||||| || | ||| | | || | | || | | ||| | | | || ||||||| Sbjct 15129 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCGGCCACGGCCCTCCTG 15071 Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714 ||||||||| | |||||| || || ||||| ||||| | || | || || || || Sbjct 15070 CTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGC 15011 Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774 || | ||||||||||| | ||| | ||| ||||||| |||||||||||||| || Sbjct 15010 CTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATC 14951 Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 116834 || |||| | || ||||||| || || ||| | || || | || || || Sbjct 14950 GGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTT 14891 Query 116835 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 116894 |||| || | || || | || ||| ||||||||||| |||||||| | || | | Sbjct 14890 CCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGC 14831 Query 116895 CCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951 || ||| |||| |||||| ||||| | || || |||||| || || || Sbjct 14830 GCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACGCAG 14771 Query 116952 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCT 117009 ||| |||| ||||| | || ||| || || || | || ||||| || | | || Sbjct 14770 CATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGA-AC-CGGTAGCG 14713 Query 117010 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCC 117069 | | ||||| || || ||| ||||| || || ||| ||||| || || | Sbjct 14712 CGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGGTC 14653 Query 117070 GTGAGACTGCCGTAGATCCCATCGATCGAGTC-ACCCTTATTTGCGATGAGGAAGCAGCT 117128 ||||| || | ||||| || || || ||| | || | | | | |||||||| Sbjct 14652 TTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGT-CAACCAGGAAGCAAGA 14594 Query 117129 CGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACAT 117188 | | || ||| || ||| | || ||||| | || || | ||||| |||| | Sbjct 14593 TGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA-GT 14535 Query 117189 ACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATAC 117247 || | ||||||||| | ||| ||||| | | | |||||| || |||||||| | Sbjct 14534 ACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTC 14475 Query 117248 CGATTGAGACCCGCATAAACATGT 117271 ||| | || ||||| | || || Sbjct 14474 CGACGGCAACACGCATGAGCAAGT 14451 >seq1188 Length=23189 Score = 131 bits (144), Expect = 2e-25 Identities = 299/447 (67%), Gaps = 16/447 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||| Sbjct 5101 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCAT 5042 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | ||| | | || ||| || | | || || Sbjct 5041 GAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC--AGCAGG 4984 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | |||| |||| |||||||| |||| || |||||||| || | || Sbjct 4983 CGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCG 4924 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || || ||||| | |||| ||| ||||||| | || || || | |||| | Sbjct 4923 CAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCC 4864 Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAG-AGTTCCACAG-----CA 127522 |||| ||||| ||| ||| || || | || | ||| | Sbjct 4863 TGAA------CCACCTTAGGATCGGGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCG 4810 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || |||||||||||||||||| ||||| || || || ||||| ||| || ||| Sbjct 4809 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGC 4750 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 || || || |||||||| | |||||| || | |||||||||||||||||||| ||| Sbjct 4749 ATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 4690 Query 127643 TCCACACACGCGAACGCAAATAGACGC 127669 || ||| ||||| |||| |||||| Sbjct 4689 TCGACAGCGGCGAAGGCAACCAGACGC 4663 >seq1663 Length=17679 Score = 100 bits (110), Expect = 3e-16 Identities = 333/505 (66%), Gaps = 31/505 (6%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 ||||| || || || || || | |||||| | ||| || | ||| ||||| || | Sbjct 5971 CGATCGAATCGTCCGGGACGCATGAGGGCCTTGTCGAGAACATCCGGTCGGTTGGTACCG 5912 Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGT-TGA 12818 || | |||||| | ||| || | ||| |||||||||||||||||| |||| | || Sbjct 5911 GCCAGGACAACCACTTGCTCGGA--GGTATTGAAGCCATCCATCTCAGT-AAGAATCTGG 5855 Query 12819 TTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT--- 12873 |||| || |||||| || || || | |||||| || | | ||||| Sbjct 5854 TTGAGAGTGCTTTCACGCTCGTCGTTTCC------ACCACCAACGTTCGACTTTGCTCGG 5801 Query 12874 ----TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT-TGATTTTCACGGGC 12928 | || | || || ||||| |||||||||| ||| || || || | ||| ||||| Sbjct 5800 GACTTTCCAATAGCATCGATTTCATCAATGAAAATGATGCAGGGGGTGTTCTTC-CGGGC 5742 Query 12929 AACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988 | | |||| || || || | || ||||||||| |||||||| || || || | Sbjct 5741 ATTGGCGAAGAGGTCGCGGACACGAGAGGGACCGACACCGACAAACATTTCGACGAACTC 5682 Query 12989 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046 || | | || || || | ||| || ||| |||||||| || |||| || || Sbjct 5681 GGAACCACTGA-CACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGC 5624 Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 13106 | ||||| || || || || || | ||||| |||||||| |||||| | ||||| Sbjct 5623 AATGTCTTACCAGTTCCGGGGGGACCTGAGAGAATAGCACCACGGGGGATCTTTGCACCC 5564 Query 13107 --CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCT 13164 |||| | | ||||||||||| | || ||| |||| ||| | ||| ||| Sbjct 5563 AGCTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCT 5506 Query 13165 TCGCGGCGTCGATGCCTTCAACGTC 13189 | || |||| ||||| ||||||| Sbjct 5505 TGGCTTCGTCCATGCCGGCAACGTC 5481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613493986588680