Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1188 145 1e-29 seq346 127 3e-24 >seq1188 Length=23189 Score = 145 bits (160), Expect = 1e-29 Identities = 333/498 (67%), Gaps = 9/498 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| ||| ||| || || |||||||| |||| ||||| Sbjct 5086 CTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTT 5027 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| ||||||||| |||||| | ||| || || || || Sbjct 5026 GGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAGGCGGTCAGCGACGAACTC 4967 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||| ||| |||| || || ||||| | ||| || || || | Sbjct 4966 GATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGT 4907 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGC-GAGACACGTTCGTACC 159887 || ||||||| |||||| |||| || || | || | | || ||| || | | | Sbjct 4906 AAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCCTGAACCACCTTAGGATC 4847 Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| | | | |||||| ||||| || || || ||||| ||| || || Sbjct 4846 GGGGCGGTGGTTC---ATGTGG---GAGAACAGCAGACAGGCGAAGTCAGTGTGGAGACC 4793 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| |||||||| | ||||||||| | | ||||| ||||| | |||||| || Sbjct 4792 CTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCCACGCTTCTT 4733 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||||| || |||| || || | || || ||||| ||||| || || || || || Sbjct 4732 AAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAAGGC 4673 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 || || | | | | |||| | | | ||| | | |||| | |||||| | || Sbjct 4672 AACCAGACGCGAAGCGAAAGTTGACTCGCGGTCGTTGATCCAGCGGAGGGCCCAGTTGGC 4613 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| || ||||| || Sbjct 4612 CTTCTTGGCAATGCAGGG 4595 >seq346 Length=34350 Score = 127 bits (140), Expect = 3e-24 Identities = 447/685 (65%), Gaps = 16/685 (2%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || || ||||| ||||||| | ||| | | || | | ||| ||||||||||||||| Sbjct 16206 TCGACAGTGAATTGAATGGGGGCGGAGGCGGCCATGGTACGCAGGTAGTACATGCCGGTC 16147 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||| ||| ||| ||| | ||||||| | || |||| || | | || || Sbjct 16146 TTGAGACCCATCTTCCAGCCGGCGAAGTGCATGCTGGTGAGCTTGCCCATGGTAGGCTCC 16087 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCAT 204021 || ||| ||||| || ||||| || |||||| |||| || || || |||||||| Sbjct 16086 TTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG-TAGGCACCGCGGTCAGCGGCCAT 16028 Query 204022 ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT-GTT 204080 | | ||| | ||| || |||||||| || |||||| ||| | | || ||| | Sbjct 16027 CTGCAGGATGTTGCGCTGTGAGATCTCCCAGACGGTCTTGTACAGGGCCTTGATGTCGGC 15968 Query 204081 GAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138 | || || || | || || || |||||| ||||| || | | || || | Sbjct 15967 GGGG---ATGTTGGGGATGTTCTGGACGGAGCCGCCATCGGCGATGATGCGGTTCTTCAT 15911 Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198 | || ||||| || | || ||| ||| || || ||||| | || ||| Sbjct 15910 ATTGTCGGACCACAGACCGAGGTCGACCAGGTCCTTCAGGAGCCAAGGGTTAACGACCTG 15851 Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258 || || || | ||| || | |||| | | | ||| |||| | |||||||| ||| Sbjct 15850 GAACTCACCAGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGTTCGAAGCACTC 15791 Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318 |||| ||| | ||| ||| ||| ||||| || |||||||| || | ||||| ||| Sbjct 15790 GTTGAAGCCCAGAATTTGACTGGTACTGGCAGTAGGCATGGGGGCGACCAGCAGACTGTT 15731 Query 204319 GCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTC---GTGCATCGCACT 204375 ||| ||||| | | | | || |||||| |||| |||||| | | |||| | Sbjct 15730 GCGGACACCAGACTCGGCAATCTTGGCCTTCAGGGAGGCCCAGTCCCAGAG-ATCG--GT 15674 Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435 ||| | | ||||||||||| |||| | |||||| || ||| || ||| ||| Sbjct 15673 GGGGGTGCGGTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCGGCGTA 15614 Query 204436 CGTCGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGT 204494 ||| ||| | | | | |||| || | || ||| || || | || ||| | || Sbjct 15613 GGTCTCATATGTACCAAGCTTCTT-GGCAATCTCGCAGGAAGCAGTCAAGGCACCGTGGT 15555 Query 204495 ACATGGTCTCAAAGATCTGAACGTT 204519 | |||||||| |||||||| | ||| Sbjct 15554 AAATGGTCTCGAAGATCTGGATGTT 15530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795138074344880