Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1609 109 1e-18 seq588 109 1e-18 seq244 96.9 8e-15 seq346 95.1 3e-14 >seq1609 Length=37815 Score = 109 bits (120), Expect = 1e-18 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 199423 AAGGTGGAGAGTCGA---CT-CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTT 199478 ||||| || ||||| || |||| |||| ||||||||| || || | ||||| | Sbjct 13160 AAGGTTGAAGGTCGATCCCTACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCT 13101 Query 199479 CCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCT 199538 | |||||||||||||||||||| || ||||||||||| || ||| || || |||| Sbjct 13100 CGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCT 13041 Query 199539 GAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCT 199598 | ||||| ||| ||| |||| |||||| | | || ||||| | || || |||| Sbjct 13040 GGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCT 12981 Query 199599 TACCCGTGAGAGTTTTCACAAAA 199621 ||||||| || || || || ||| Sbjct 12980 TACCCGTCAGGGTCTTGACGAAA 12958 >seq588 Length=1505 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||||||||| ||||||||||||| ||| || || | | || | ||||| Sbjct 160 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 219 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| |||||||||||||| ||| ||| || || ||| Sbjct 220 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 279 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| || || | | || || || | ||||| || Sbjct 280 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 339 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 340 TTGCCAGTGA 349 >seq244 Length=29022 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| |||||| || | | ||| | ||||| Sbjct 25077 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 25018 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| ||||||||||| || ||||||||||| || Sbjct 25017 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 24977 >seq346 Length=34350 Score = 95.1 bits (104), Expect = 3e-14 Identities = 168/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827 || |||||||||| |||||||| ||||| ||| | |||||| | | |||| || | Sbjct 15174 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTAC 15115 Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887 || || | || || || | || | | | | || || | ||||| || | ||| Sbjct 15114 CAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAG 15055 Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947 || | ||||| || | ||||| | || | || ||||| || || || ||||| ||| Sbjct 15054 AGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAG 14995 Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007 || |||| | || | || ||| || | |||||||||||| |||| |||||| | ||| Sbjct 14994 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCG 14935 Query 168008 TAGAA 168012 ||||| Sbjct 14934 TAGAA 14930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178895574200441