Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq346 219 5e-52 seq1663 87.8 2e-12 seq1188 82.4 9e-11 >seq346 Length=34350 Score = 219 bits (242), Expect = 5e-52 Identities = 577/868 (66%), Gaps = 27/868 (3%) Strand=Plus/Minus Query 110272 ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTG 110331 ||||| ||||||| || | || || || ||||| |||| ||| || | | || Sbjct 15309 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 15250 Query 110332 TATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391 || || | ||| || || |||| |||||| || ||| ||||| ||||||||| || Sbjct 15249 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 15190 Query 110392 GATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGAC 110451 || |||||| |||||||| ||||||||| | ||| ||||||| || ||||| | | Sbjct 15189 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 15130 Query 110452 TTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGA-GACCTTC 110507 | ||||||||| | ||| | | || | | | | | ||| |||| || | | || || Sbjct 15129 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCG---GCCACGGCCCTC 15074 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 || ||||||||| | ||| | | || || || | ||||| ||||||| || || Sbjct 15073 CTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGG 15014 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGAA 110624 |||| || |||||||||||| | ||| | |||| | ||||||| | ||||||||| Sbjct 15013 GGCCTCGTTGGGACAGAAGAGTGTCCAGT---CACCGTTGGCCTCAACGCGCTTCATGAA 14957 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 || || ||| |||||| || |||| ||||||||| |||| |||| || | ||| || Sbjct 14956 GAGATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTG 14897 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| || || || | || || | || ||| | |||||| || || || |||| || Sbjct 14896 GTTCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGC 14837 Query 110745 GATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 | | || | | || ||| |||||| ||||||||| || ||| || || Sbjct 14836 AAAAGCGCC---AGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAA 14780 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 || | |||||||||| ||| || | ||| || || || || | ||| || Sbjct 14779 CACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACC 14720 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 | || |||||| ||||| | || ||| ||||| || || ||| || || Sbjct 14719 GGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGC 14660 Query 110919 ACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 ||| ||| |||| || |||| ||||| ||||| ||||| | | ||| || | Sbjct 14659 ACAGGTCT-TGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGA 14601 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 ||||||| | | ||| || | || || | |||||||| | || || | || ||| Sbjct 14600 AGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAG 14541 Query 111038 TGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCG 111096 |||| || | ||||||||| || |||||| || | || | || | ||| Sbjct 14540 TGAA-GTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCG 14482 Query 111097 TGAATACCAATGGCAACTCGCATGAACA 111124 ||||| || | |||||| ||||||| || Sbjct 14481 TGAATTCCGACGGCAACACGCATGAGCA 14454 >seq1663 Length=17679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 330/507 (65%), Gaps = 23/507 (5%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| || || || || | || || | || |||| ||| ||||| ||| || Sbjct 5971 CGATCGAATCGTCCGGGACGCATGAGGGCCTTGTCGAGAACATCCGGTCGGTTGGTACCG 5912 Query 11563 GCAATGACTACAA--TGCCAGTCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| || | ||| || | | | ||| || ||||| || || |||| |||| Sbjct 5911 GCCAGGACAACCACTTGC---TCGGAGGTATTGAAGCCATCCATCTCAGTAAGAATCTGG 5855 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCAT-ACCACCTGCCGAAC--GCTT---- 11672 |||| || ||||||||| ||||| || |||| | ||| ||| Sbjct 5854 TTGAGAGTGCTTTCACGCTCGTCGTTTC----CACCACCAACGTTCGACTTTGCTCGGGA 5799 Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 ||| || | ||| || || ||||| ||||| | ||| || || ||| || || | Sbjct 5798 CTTTCCAATAGCATCGATTTCATCAATGAAAATGATGCAGGGGGTGTTCTTCCGGGCATT 5739 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || || || ||||| | || ||||| || ||||| || ||||| | | Sbjct 5738 GGCGAAGAGGTCGCGGACACGAGAGGGACCGACACCGACAAACATTTCGACGAACTCGGA 5679 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || |||||| | ||| || || ||| |||||||| |||| ||| || | | Sbjct 5678 ACCACTGACACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAATG 5620 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909 ||||||| || || || | ||| | ||||| || |||||||||||||| ||||| || Sbjct 5619 TCTTACCAGTTCCGGGGGGACCTGAGAGAATAGCACCACGGGGGATCTTTGCACCCAGCT 5560 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | | ||||| || | || ||||||| || | ||| | || ||||||| Sbjct 5559 TC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTGGC 5502 Query 11970 GGAGTCGATACCCTCAACATCGGTGAA 11996 ||| || || |||| |||| ||| Sbjct 5501 TTCGTCCATGCCGGCAACGTCGGAGAA 5475 >seq1188 Length=23189 Score = 82.4 bits (90), Expect = 9e-11 Identities = 145/210 (69%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||| ||||| || ||| || |||||||| || || Sbjct 4800 TGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCCA 4741 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| || ||||| |||||||| ||||| ||| | Sbjct 4740 CGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCG 4681 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGAC----TTGTCGAACCACTTGAGAGC 119683 ||||| || | |||||| ||| |||| | || | | || || ||| ||| || Sbjct 4680 GCGAAGGCAACCAGACGCGAAGCGAAAGTT-GACTCGCGGTCGTTGATCCAGCGGAGGGC 4622 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 |||||||||||| | |||||||| || Sbjct 4621 CCAGTTGGCCTTCTTGGCAATGCAGGGAAC 4592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963314929400