Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq588 120 7e-22 seq1609 104 5e-17 seq244 95.1 3e-14 seq346 91.5 3e-13 >seq588 Length=1505 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| ||||| || || ||||| | ||| || | ||||| || Sbjct 163 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 222 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || || ||||| |||||||| || || ||||| || Sbjct 223 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 282 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||||||||| || || || || Sbjct 283 ATCTTGGACTTGACGTTGTCGATAGTATC 311 >seq1609 Length=37815 Score = 104 bits (114), Expect = 5e-17 Identities = 133/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| ||||||||||| || |||||||| Sbjct 13137 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 13078 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || |||||||| || || || || || || ||||||||| || Sbjct 13077 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 13018 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 13017 ATGGTGTCGCTCGA---CTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12961 Query 195130 AA 195131 || Sbjct 12960 AA 12959 >seq244 Length=29022 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || |||||||| | ||||| | ||||| ||| Sbjct 25074 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCG 25015 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || || ||||| || || || || || |||||| Sbjct 25014 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 24958 >seq346 Length=34350 Score = 91.5 bits (100), Expect = 3e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| | |||||| ||||||| ||||||||| | || | | ||| || || ||| Sbjct 14930 TTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGG 14989 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || ||||||||||| || || || || || | |||||| || ||| |||||||| Sbjct 14990 ACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGAC 15049 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 |||| || | | ||||| | ||||| | | | ||| | ||||| || | Sbjct 15050 GCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACTATCAAGGCTCAGAAG 15109 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 || ||| | ||| || | || || ||| |||| ||||| || |||||| Sbjct 15110 CTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTCTACAAG 15169 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 ||||| | |||||||||||||||||| Sbjct 15170 GATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 15202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109457107153541