Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq588 120 7e-22
seq1609 104 5e-17
seq244 95.1 3e-14
seq346 91.5 3e-13
>seq588
Length=1505
Score = 120 bits (132), Expect = 7e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| ||||| || || ||||| | ||| || | ||||| ||
Sbjct 163 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 222
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||||||||| || || ||||| |||||||| || || ||||| ||
Sbjct 223 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 282
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
|| || ||||||||| || || || ||
Sbjct 283 ATCTTGGACTTGACGTTGTCGATAGTATC 311
>seq1609
Length=37815
Score = 104 bits (114), Expect = 5e-17
Identities = 133/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| ||| || || | ||||| ||||||||||| || ||||||||
Sbjct 13137 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 13078
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| || |||||||| || || || || || || ||||||||| ||
Sbjct 13077 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 13018
Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|||||||| ||| || || || ||||||| ||||| || |||| || || |||
Sbjct 13017 ATGGTGTCGCTCGA---CTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12961
Query 195130 AA 195131
||
Sbjct 12960 AA 12959
>seq244
Length=29022
Score = 95.1 bits (104), Expect = 3e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || ||||| || || || |||||||| | ||||| | ||||| |||
Sbjct 25074 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCG 25015
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|||||||| || |||||||| || || || ||||| || || || || || ||||||
Sbjct 25014 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 24958
>seq346
Length=34350
Score = 91.5 bits (100), Expect = 3e-13
Identities = 184/273 (67%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
|||||||| | |||||| ||||||| ||||||||| | || | | ||| || || |||
Sbjct 14930 TTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGG 14989
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| || ||||||||||| || || || || || | |||||| || ||| ||||||||
Sbjct 14990 ACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGAC 15049
Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768
|||| || | | ||||| | ||||| | | | ||| | ||||| || |
Sbjct 15050 GCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACTATCAAGGCTCAGAAG 15109
Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828
|| ||| | ||| || | || || ||| |||| ||||| || ||||||
Sbjct 15110 CTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTCTACAAG 15169
Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861
||||| | ||||||||||||||||||
Sbjct 15170 GATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 15202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109457107153541
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |