Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq346 158 4e-33
seq1490 102 2e-16
seq1025 84.2 6e-11
seq410 84.2 6e-11
>seq346
Length=34350
Score = 158 bits (174), Expect = 4e-33
Identities = 364/546 (67%), Gaps = 7/546 (1%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
||||| || ||||||||| ||||||||| || || || || || | |||||||||
Sbjct 15252 CTGTACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 15193
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
||| || |||| |||||||||||||| || ||| | ||| | || ||||| ||||
Sbjct 15192 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGA 15133
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807
|| || ||||| |||||| | | || || || |||| | | ||| |||
Sbjct 15132 GCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCC 15073
Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
||| || || | || | ||||| | | || |||||||| |||| ||| || |
Sbjct 15072 TGCTCGTACTTCGCGTAGAGAGCGT--CGAACTCATCACCGTAGACATCAGCCAGGCCGG 15015
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925
|| || | ||| || || || | ||| || | || |||| ||| || |
Sbjct 15014 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 14955
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985
||| | ||| | ||| ||||| ||||| | || |||||| | ||||| |
Sbjct 14954 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 14895
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
||||||| || || | ||| || | ||| | || |||||||| || || ||||
Sbjct 14894 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 14835
Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
|| ||| | |||| |||||||| || ||||| || || || || || || ||||
Sbjct 14834 AAGCGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 14775
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
|||||||||| |||||| ||||| | ||| |||||||| | ||| | |||||| | |
Sbjct 14774 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 14715
Query 156163 AGCGAA 156168
|||||
Sbjct 14714 CGCGAA 14709
>seq1490
Length=30157
Score = 102 bits (112), Expect = 2e-16
Identities = 107/140 (76%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| ||||||||| | || ||||| |||||| | |||||||||
Sbjct 7244 AGAATTTCCTTGAGACGTGGAACACCAAGCGTGACGTT---CTTGGATGACACACCAGCA 7300
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|||||||| || ||||| || | |||||| | |||||||||||| || |||||||
Sbjct 7301 AAGTGGAAGGTGTTCAGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGA 7360
Query 301933 ATACCAACCATTTCTCCTGG 301952
| || |||||||| || ||
Sbjct 7361 ACGCCGACCATTTCACCAGG 7380
>seq1025
Length=40114
Score = 84.2 bits (92), Expect = 6e-11
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 353938 TCGGGGCAGAGTGCAGAATAGAATTCC-CGCTGATGAGATATAATAATCACACC-CCCAA 353995
|| |||||||| ||| ||| ||| || || ||||| || |||| ||||| |||
Sbjct 13433 TCAGGGCAGAGAGCACCCACGAACTCCTCGTTG-TGAGAAATCATAACAACACCACCCTT 13375
Query 353996 GATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAG 354055
|| | | ||| || ||| ||| |||| ||||||||||| || | ||| ||||| |
Sbjct 13374 GAAGTCACG-AATGGCAACGGCCAGACCACCGAGCGAGTCACGATCCAAGAAGTTAGTCG 13316
Query 354056 GTTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAA 354115
| ||||| |||| || | ||| || | ||||||| || |||| || || ||||| |
Sbjct 13315 GCTCGTCCAGGACCAGCAAGTGGGGGTTGTTCCACATAGCACCAGCAAGCACGACCTTGA 13256
Query 354116 CCTTCTGTCCGCCTGATAG 354134
||||||| || || || ||
Sbjct 13255 CCTTCTGACCACCGGAAAG 13237
>seq410
Length=21701
Score = 84.2 bits (92), Expect = 6e-11
Identities = 125/177 (71%), Gaps = 8/177 (5%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| ||||| | |||||||||||||| ||||| || |||||||| |||||||| || ||
Sbjct 1118 GCGCCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCGTCACGG 1177
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600
|| | |||||| | |||||||| || ||| | ||||||| | |||||
Sbjct 1178 GCACGACCCTCCACGGGCTGACGGGTCAGAATCTGAGTAGGACCACGAGCACGAGCG--- 1234
Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
|| ||| || | ||||| || |||||||||||| | | |||||| | |||
Sbjct 1235 -TGGATCTTGTCGTCCACCATGTGGCGCAGACGCTGGTAGTAGGTGGGACCCAAGAA 1290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471785108246651
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |