Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq346 143 3e-28 seq1188 131 2e-24 seq468 118 1e-20 seq56 111 2e-18 seq1395 96.9 4e-14 >seq346 Length=34350 Score = 143 bits (158), Expect = 3e-28 Identities = 291/435 (67%), Gaps = 8/435 (2%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| ||| ||||| ||||||||||||| | || | ||||||||||||| |||||| Sbjct 15248 ACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTA 15190 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || |||| || ||||||| ||||||| |||| || ||||| |||| ||| Sbjct 15189 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 15130 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337 ||| ||||| |||||| || | || | || |||| ||| | ||||||| Sbjct 15129 TCGAGAATGGCGTACCAGAGCTTCTGAGC---CTTGATAGTCTTGCGGCCACGGCCCTCC 15073 Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397 || || | | |||||| || ||||||||| Sbjct 15072 TGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGG 15013 Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457 |||||| ||||| ||||| | |||||| || || | | |||| ||| ||||| Sbjct 15012 GCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGA 14953 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| ||||| |||||||| || || || ||||||||| ||||||||| Sbjct 14952 TCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTC 14893 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || || || || | |||| | |||||||||||||||||||||||| |||||| Sbjct 14892 TTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAA 14833 Query 1628578 GCGCCCTTGCGCTTG 1628592 ||||| ||||||| Sbjct 14832 GCGCCAGGGCGCTTG 14818 >seq1188 Length=23189 Score = 131 bits (144), Expect = 2e-24 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 5109 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 5050 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 5049 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC 4990 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||||||||||| ||||||||| || ||||||||| | Sbjct 4989 AGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGC 4930 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || | || || | || | | ||||| | ||| || |||||||||| || ||| Sbjct 4929 AGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATG 4870 Query 868931 AT 868932 || Sbjct 4869 AT 4868 Score = 122 bits (134), Expect = 1e-21 Identities = 181/252 (72%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 4457 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATCTGG 4398 Query 869693 ACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751 ||||| | || |||| || || | ||||||||| || || |||||| ||||||||| Sbjct 4397 ACCTC-TCCACTGAAACGCTCGACAAGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAA 4339 Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTG 869808 || ||||||||||| || |||| ||||| |||||| | | ||| ||||| Sbjct 4338 GAAGGCCAGGACGTGGGAAATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTC 4279 Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | || | ||| || | |||||| |||||||||| |||||||||||||| || Sbjct 4278 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTT 4219 Query 869869 GTACATCTCCCA 869880 |||||| | ||| Sbjct 4218 GTACATTTGCCA 4207 >seq468 Length=68066 Score = 118 bits (130), Expect = 1e-20 Identities = 121/157 (77%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || |||||| ||||||||||| | || || |||||| Sbjct 36702 GACAGCATCGGTGGAACCGTAACATGCGTGATCCGCAACGTGCCAGTTGGACTGGGCGAG 36643 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || ||| ||||| |||||| ||||| ||||| |||||| Sbjct 36642 CCCTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCCACC 36583 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 36582 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 36546 Score = 87.8 bits (96), Expect = 2e-11 Identities = 199/297 (67%), Gaps = 8/297 (3%) Strand=Plus/Minus Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180 |||||||||||| |||| || || ||| || | || ||||||||||||| ||| Sbjct 37366 GTCGGCTGCATCGTCGATGGATGCCCTCCGGGCCTAGAGCTCACCGAGGCCGACATTCAG 37307 Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240 || || || |||||||| || ||||| |||| || | || ||||| ||||| Sbjct 37306 CCCCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCTCACTACCCCGCGGGACGAGAAG 37247 Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGC 18300 || || ||| |||||||| ||||| ||| |||| |||| || ||| | || | | Sbjct 37246 GACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCGTCACTCTGGGCACACCAATTGCT 37187 Query 18301 CTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAA------G 18354 | | || ||| |||||||| ||| ||||| || || | ||| Sbjct 37186 ATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGACTACGGCGGCA-GCACAATGGACCT 37128 Query 18355 GTGCCGCGGCCCT-CACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGC 18410 || || | ||||| || ||||||| ||||||| | | |||||||| ||||||| Sbjct 37127 GTACCCCCGCCCTAGCCATGCCGACTTCACCTACCTCGAGAAGTACGGTGTCAAGGC 37071 >seq56 Length=17532 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||| ||||| || |||||| |||| || || | || || ||| | || || ||| Sbjct 8853 GCCGCCAATTACCTGGATATCAAGGCTCTCCTTGACGTCGGCTGTAAGACCGTCGCTAAC 8912 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||| ||||||||||| || |||||||||||||||||||| |||||| || Sbjct 8913 ATGATTAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 8963 >seq1395 Length=71990 Score = 96.9 bits (106), Expect = 4e-14 Identities = 245/367 (67%), Gaps = 13/367 (4%) Strand=Plus/Minus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | |||||| | || | || | | || ||||||||| Sbjct 52316 TGGGGGTGCGAGGCGGCGCCGATGGCGTCCACGGCAACGGTCAGGTTACCATCGGTGCCG 52257 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| | || || | ||||||||| | ||| |||| Sbjct 52256 TTCTTGTAGCCGATGGGGAAGGACAGGCCGGAGGCGAGCTCGCGGTGAAGCTGAGACTCG 52197 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCC---AAATAAGGGGCCACC 1726861 || ||||| ||||| | |||||| || | ||| |||||| || | ||||| Sbjct 52196 GTGGTGCGGGCGCCGATCGCGCCCAGCGAGATCAGATCTGCCAGGAACTGAGGGG----- 52142 Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919 ||| || | ||| | ||| ||| | ||| | || | | | | || ||| Sbjct 52141 AGATGGTGTCGAGCATCTCCGAGGCGATGGGGAG-TC--CCGTGCTGGTCAGGTCGGTGT 52085 Query 1726920 ACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGT 1726979 |||| || ||| | ||| || | | | | | | | | |||||| |||||||| Sbjct 52084 ACAGCTTACGGGACACGCGCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATGTCGGGGT 52025 Query 1726980 CGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGA 1727039 || | ||| |||||||| ||||| || ||||| ||||| || | ||||||||||||| Sbjct 52024 CGTTAATCAGACCCTTCCAGCCGACTGTTGTGCGGGGCTTCTCCAGGTAGGCGCGCATGA 51965 Query 1727040 CCACGCA 1727046 |||||| Sbjct 51964 TCACGCA 51958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106997802551191