Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq346 134 2e-25
seq1188 122 1e-21
seq56 105 1e-16
seq1652 102 1e-15
>seq346
Length=34350
Score = 134 bits (148), Expect = 2e-25
Identities = 290/437 (66%), Gaps = 12/437 (3%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| ||| | ||| ||||||||||||| | || | || |||||||||| ||||||
Sbjct 15248 ACTCGACAATCTCAGTGCACAGGTTGGAG--CTGCGAATAGTACCCAGGTTCTTCTGGTT 15191
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
|| || |||| || ||||||| |||||| |||| ||| ||||| |||| ||
Sbjct 15190 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGC 15131
Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747
| || ||||| |||| | || | || || || ||| |||||||
Sbjct 15130 CTCGAGAATGGCGTACCAGA----GCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCT 15075
Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807
|||| ||||| || | | |||| | || ||||||||
Sbjct 15074 CCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGG 15015
Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867
| |||||| || || ||||| | |||||| ||| | | | ||||| ||| || |
Sbjct 15014 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 14955
Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927
| ||| ||||||| |||| ||||| || || || || ||||||||| |||||||
Sbjct 14954 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 14895
Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987
|||| ||| || || | |||| || |||||||||||||||||||||||| |||||
Sbjct 14894 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 14835
Query 2071988 AGGCGCCCTTGCGCTTG 2072004
| ||||| |||||||
Sbjct 14834 AAGCGCCAGGGCGCTTG 14818
>seq1188
Length=23189
Score = 122 bits (134), Expect = 1e-21
Identities = 177/250 (71%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 5117 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 5058
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| ||||||| | ||| ||||||| | ||||| ||||| | ||||
Sbjct 5057 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 4998
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | ||||||||||| |||||||| || ||||||| ||||||||| || |||||
Sbjct 4997 GAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCA 4938
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||| | || | ||| || | || | | ||||| | ||| || |||||||||
Sbjct 4937 TGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCT 4878
Query 794131 CGATGATGAT 794140
| | |||||
Sbjct 4877 CAACAATGAT 4868
>seq56
Length=17532
Score = 105 bits (116), Expect = 1e-16
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|||||||| ||||| || |||||| | ||||| || | || || |||||||| || |||
Sbjct 8853 GCCGCCAATTACCTGGATATCAAGGCTCTCCTTGACGTCGGCTGTAAGACCGTCGCTAAC 8912
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
| || ||||||||||| || ||||| |||||||||||||| |||||| ||
Sbjct 8913 ATGATTAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 8963
>seq1652
Length=21109
Score = 102 bits (112), Expect = 1e-15
Identities = 122/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | |
Sbjct 12241 GTACTTGGTGACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCACCGGGGAG 12182
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || ||||| | |||||||||||| |||| | ||| || |||||| || |
Sbjct 12181 GATGAGACGCACAGAGGTCTGGATCTCCCGGGAGGAGATAGTAGACTTCTTGTT-GTAAG 12123
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| ||||| | ||||||||| ||| || |||| |||||
Sbjct 12122 CGGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAGATGTC 12080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916063116631397
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |