Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1188 158 2e-32
seq346 122 1e-21
>seq1188
Length=23189
Score = 158 bits (174), Expect = 2e-32
Identities = 220/303 (73%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||||||||||||||| |||||||| |||||| | || |
Sbjct 4203 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATC 4261
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
|| | || |||| ||||| ||| ||| |||||| ||||| | |||
Sbjct 4262 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 4317
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
|| |||||||| ||||| || ||||||| ||| || || || ||||||||| |
Sbjct 4318 ATTTCCCACGTCCTGGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGT 4376
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| || || | ||||||||| | || ||||| |||| || ||||| ||||||||
Sbjct 4377 CGAGCGTTTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 4436
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || |||||||| || || |||||||| || | |||||
Sbjct 4437 CATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTATATTAAGGA 4496
Query 1456068 CCC 1456070
||
Sbjct 4497 GCC 4499
Score = 114 bits (126), Expect = 2e-19
Identities = 184/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
||||| || |||||||||| || ||| | ||||| | | || | || || |
Sbjct 4868 ATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTTCCTTACTGACGCTCTTCCCTGCGGT 4927
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | ||||||||| ||| |||||||||| ||||||| || || ||||| |||||||
Sbjct 4928 CTGCTTGGCATGAACTCCAA-GCTCATGTGCGAGTACATCGAGTTC-GTCGCTGACCGCC 4985
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||| | ||| |||||| | ||||| ||||| | ||||||| ||| | |||
Sbjct 4986 TGCTGGTGGCTCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCATG 5044
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|||| ||||| || | |||||||||||||| |||||| || || || || |||
Sbjct 5045 GAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 5104
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
||||| || |||| ||||
Sbjct 5105 AAGGCTGGTGTCATGGCCA 5123
>seq346
Length=34350
Score = 122 bits (134), Expect = 1e-21
Identities = 202/289 (70%), Gaps = 2/289 (1%)
Strand=Plus/Plus
Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
||||| ||| ||| ||||| ||| || | ||||| | || ||||||| || || |
Sbjct 14522 ATGTCCCAGAAGTACTTCAC-TCACGCCTCCCCCACTTTGTTCAATGCCGCTACTCCCCA 14580
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
|| ||| | | || ||||| ||| | ||| ||| || || || ||||| |||||
Sbjct 14581 GCCCCAGCTTGCATCTTGCTTCCTGGTTGACGTGAGCGCAGACAGCATTGAGGGTATCTA 14640
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
|||||| |||||| || || | ||||||||| | || ||||| |||||| | ||
Sbjct 14641 TGACACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGCGGTATCGGTCTGAACGT 14700
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
||| | ||||| | || | ||| | | || ||||||||| |||||||| |
Sbjct 14701 CCACCGCATTCGCGCTACCGGTTCGTACATTGGTGGAACCAACGGCTCCTCCAACGGTAT 14760
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
||| || ||||| || || |||||| |||| || ||||| || ||||||
Sbjct 14761 TGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATGTTGACCAG 14809
Score = 109 bits (120), Expect = 8e-18
Identities = 295/454 (65%), Gaps = 40/454 (9%)
Strand=Plus/Plus
Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855
||||||| ||||| |||||| ||||||||| |||||||||||||| || || | |
Sbjct 14818 CAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 14877
Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915
|| || || ||||||||||| || ||||| || | || || || |||||
Sbjct 14878 CCTTGATCTGCGGAAGAACCACGGTAA-GGAGGAGG-----TTCGTGCCCGTGACCTCTT 14931
Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975
|||| ||||||| ||| || || ||| ||| | | | || | | |||||| |
Sbjct 14932 CTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 14991
Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035
||||| || || |||||| ||||||||| || ||| || | | || |||||
Sbjct 14992 ACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGACGC 15051
Query 262036 CCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGAC--- 262091
||||| | | || ||| | |||| ||||| |||
Sbjct 15052 TCTCTACGCGAAGTACGA---------------GCAGGAGGGCCGTGGCCGCAAGACTAT 15096
Query 262092 -----------AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTA 262140
|| |||||| |||||| ||| ||| || | ||||| || | ||||
Sbjct 15097 CAAGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTT 15156
Query 262141 CATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CG 262198
|||| |||||||||| || |||| || || |||||| |||||||||| || | ||
Sbjct 15157 CATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCG 15216
Query 262199 ACAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232
||| ||||||||||||| ||||| ||| |||
Sbjct 15217 -CAG-CTCCAACCTGTGCACTGAGATTGTCGAGT 15248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177645013483126
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |