Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq346 275 8e-69
seq1188 84.2 3e-11
>seq346
Length=34350
Score = 275 bits (304), Expect = 8e-69
Identities = 588/872 (67%), Gaps = 15/872 (2%)
Strand=Plus/Minus
Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280
||||| | || ||||||| || |||| ||||| |||||| |||||| | ||
Sbjct 15309 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 15250
Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340
||||| | ||| || || || | |||||| || ||| || |||| ||||| ||||||
Sbjct 15249 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 15190
Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400
|||||||||||||| |||||||||||||||||| |||| | || ||||| ||||| |
Sbjct 15189 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 15130
Query 111401 TTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCG 111458
| |||||| || | ||| | | || | | | || || | ||| | | || ||||||
Sbjct 15129 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCG--GCCACGGCCCTCCT 15072
Query 111459 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 111518
||||||||| | |||||| || || ||||| ||||| | || | || || || |
Sbjct 15071 GCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGG 15012
Query 111519 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGT 111578
||| || |||||||| || | ||| | ||| ||||||| ||||||||||| || |
Sbjct 15011 CCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGAT 14952
Query 111579 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 111638
| ||| |||||| | | ||||| || | ||| |||| || | ||| |||||
Sbjct 14951 CGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCT 14892
Query 111639 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698
|| | ||||||||||| | || ||| |||||||| ||||| || |||| || | ||
Sbjct 14891 TCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAG 14832
Query 111699 ATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 111752
|| ||| | ||| | || | |||||||| || ||| |||||| || |
Sbjct 14831 CGCCAGGGCGCTTGTTA---CCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 14775
Query 111753 GAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGG 111812
| ||||| |||| |||||| | || || || || || | ||| || | |
Sbjct 14774 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 14715
Query 111813 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACT 111872
| | | |||| || || || ||||| ||||| ||| ||||| |||||
Sbjct 14714 CGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGG 14655
Query 111873 CCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAAC 111932
| | ||||| |||||||||| | || ||| | | | | | |||||||||
Sbjct 14654 TCTTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAG 14595
Query 111933 TGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA 111992
| | ||| || || ||| | |||||||| | || || | |||||| ||||
Sbjct 14594 ATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA-G 14536
Query 111993 TACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 112051
||| | ||||||||| || ||||||||| | | | |||||||| || ||||| ||
Sbjct 14535 TACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATT 14476
Query 112052 CCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|||| || || ||||||| || || ||| ||
Sbjct 14475 CCGACGGCAACACGCATGAGCAAGTGCTGAGG 14444
>seq1188
Length=23189
Score = 84.2 bits (92), Expect = 3e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
|||||||||||| || || || || || || || ||||| || || ||||| || ||
Sbjct 4801 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCC 4742
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||| | ||| | || | | |||||| || ||||||||||||||||| |||
Sbjct 4741 ACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 4682
Query 122790 CGCAAACGCAA 122800
|| || ||||
Sbjct 4681 GGCGAAGGCAA 4671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628018473760800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |