Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq346 210 3e-49
seq1188 120 4e-22
>seq346
Length=34350
Score = 210 bits (232), Expect = 3e-49
Identities = 574/867 (66%), Gaps = 19/867 (2%)
Strand=Plus/Minus
Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754
||||| | || ||||||| || ||||| || || |||| |||||| || ||
Sbjct 15309 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 15250
Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814
||||| | ||| || ||||||| ||| || || ||| || |||| |||||| || ||
Sbjct 15249 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 15190
Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874
||| |||| || ||||||||||| |||||| | || | || ||||| || || | |
Sbjct 15189 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 15130
Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC 118933
| |||||| || | ||||| | || | || | | ||| | | | || ||||| |
Sbjct 15129 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCGGCCACGGCCCTCCTG 15071
Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993
||||||||| | |||||| || || ||||| ||||| | | || | || || || ||
Sbjct 15070 CTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGC 15011
Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053
|| | || |||||||| | ||| | ||| ||||||| |||||||||||||| ||
Sbjct 15010 CTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATC 14951
Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113
|| |||| | || ||||||| || || ||| | || || | || || ||
Sbjct 14950 GGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTT 14891
Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173
|||| || | || || | || ||| ||||||||||| |||||||| | || | |
Sbjct 14890 CCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGC 14831
Query 119174 CCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACG 119227
|| | | || |||| |||||| ||||| | || ||| |||||| |||||
Sbjct 14830 GCC---AGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACG 14774
Query 119228 AAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTG 119285
||||| |||| ||||| | ||| ||| || || || | || ||||| || |
Sbjct 14773 CAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGA-AC-CGGTA 14716
Query 119286 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345
|| | | ||||| || || ||| ||||| || || ||| ||||| || ||
Sbjct 14715 GCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAG 14656
Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC-ACCCTTATTTGCGATGAGGAAGCA 119404
| ||||| || | ||||| || || || ||| | || | | | | ||||||||
Sbjct 14655 GTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGT-CAACCAGGAAGCA 14597
Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464
| | || ||| ||| ||| | || ||||| | ||| || | ||||| ||||
Sbjct 14596 AGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA 14537
Query 119465 CATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAA 119523
||| | ||||||||| || ||| ||||| | | | |||||| || |||||||
Sbjct 14536 -GTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAA 14478
Query 119524 TACCGATCGAGACCCGCATAAACATGT 119550
| |||| | || ||||| | || ||
Sbjct 14477 TTCCGACGGCAACACGCATGAGCAAGT 14451
>seq1188
Length=23189
Score = 120 bits (132), Expect = 4e-22
Identities = 301/455 (66%), Gaps = 18/455 (4%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| || ||| | ||| ||||||
Sbjct 5100 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 5041
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841
|| || || ||||| | | ||| | ||| || | | | | | ||
Sbjct 5040 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC------AGC 4987
Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901
|| || || | |||| |||| |||||||| |||| || ||||||||| || | ||
Sbjct 4986 AGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGA 4927
Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961
|| || || ||||| | |||| ||| ||||||| | || || || | ||||
Sbjct 4926 CCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATG 4867
Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC---GGCA 130018
| |||| || | | || | | | || | | | ||| || |||
Sbjct 4866 TCCTGAACCACCTTAGGATCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAGGCG 4810
Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078
|| || |||||||||||||||||| ||||| || || || ||||| ||| || |||
Sbjct 4809 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGC 4750
Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138
|| || || |||||||| | |||||| || | |||||||||||||||||||| |||
Sbjct 4749 ATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 4690
Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173
|| ||| ||||| |||| |||||| ||| ||
Sbjct 4689 TCGACAGCGGCGAAGGCAACCAGACGCGAAGCGAA 4655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618421880451880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |