Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq346 210 3e-49 seq1188 120 4e-22 >seq346 Length=34350 Score = 210 bits (232), Expect = 3e-49 Identities = 574/867 (66%), Gaps = 19/867 (2%) Strand=Plus/Minus Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 ||||| | || ||||||| || ||||| || || |||| |||||| || || Sbjct 15309 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 15250 Query 118755 TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 118814 ||||| | ||| || ||||||| ||| || || ||| || |||| |||||| || || Sbjct 15249 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 15190 Query 118815 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 118874 ||| |||| || ||||||||||| |||||| | || | || ||||| || || | | Sbjct 15189 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 15130 Query 118875 TTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC 118933 | |||||| || | ||||| | || | || | | ||| | | | || ||||| | Sbjct 15129 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATAGTCTTGCGGCCACGGCCCTCCTG 15071 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993 ||||||||| | |||||| || || ||||| ||||| | | || | || || || || Sbjct 15070 CTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGC 15011 Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 || | || |||||||| | ||| | ||| ||||||| |||||||||||||| || Sbjct 15010 CTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATC 14951 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113 || |||| | || ||||||| || || ||| | || || | || || || Sbjct 14950 GGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTT 14891 Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173 |||| || | || || | || ||| ||||||||||| |||||||| | || | | Sbjct 14890 CCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAGC 14831 Query 119174 CCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACG 119227 || | | || |||| |||||| ||||| | || ||| |||||| ||||| Sbjct 14830 GCC---AGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACACG 14774 Query 119228 AAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTG 119285 ||||| |||| ||||| | ||| ||| || || || | || ||||| || | Sbjct 14773 CAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGA-AC-CGGTA 14716 Query 119286 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345 || | | ||||| || || ||| ||||| || || ||| ||||| || || Sbjct 14715 GCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAG 14656 Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC-ACCCTTATTTGCGATGAGGAAGCA 119404 | ||||| || | ||||| || || || ||| | || | | | | |||||||| Sbjct 14655 GTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGT-CAACCAGGAAGCA 14597 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 | | || ||| ||| ||| | || ||||| | ||| || | ||||| |||| Sbjct 14596 AGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA 14537 Query 119465 CATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAA 119523 ||| | ||||||||| || ||| ||||| | | | |||||| || ||||||| Sbjct 14536 -GTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAA 14478 Query 119524 TACCGATCGAGACCCGCATAAACATGT 119550 | |||| | || ||||| | || || Sbjct 14477 TTCCGACGGCAACACGCATGAGCAAGT 14451 >seq1188 Length=23189 Score = 120 bits (132), Expect = 4e-22 Identities = 301/455 (66%), Gaps = 18/455 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || ||| | ||| |||||| Sbjct 5100 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 5041 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | ||| || | | | | | || Sbjct 5040 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACC------AGC 4987 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || || || | |||| |||| |||||||| |||| || ||||||||| || | || Sbjct 4986 AGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGA 4927 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || ||||| | |||| ||| ||||||| | || || || | |||| Sbjct 4926 CCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATG 4867 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC---GGCA 130018 | |||| || | | || | | | || | | | ||| || ||| Sbjct 4866 TCCTGAACCACCTTAGGATCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAGGCG 4810 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||||||||| ||||| || || || ||||| ||| || ||| Sbjct 4809 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGC 4750 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||| | |||||| || | |||||||||||||||||||| ||| Sbjct 4749 ATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 4690 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173 || ||| ||||| |||| |||||| ||| || Sbjct 4689 TCGACAGCGGCGAAGGCAACCAGACGCGAAGCGAA 4655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618421880451880