Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq346 242 4e-59 seq1687 140 4e-28 >seq346 Length=34350 Score = 242 bits (268), Expect = 4e-59 Identities = 516/764 (68%), Gaps = 10/764 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||||| || ||| | || || ||||| || ||| | | | Sbjct 14444 CCTCAGCACTTGCTCATGCGTGTTGCCGTCGGAATTCACGGCGAGGACATTGAGAAGGCC 14503 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 |||||| ||| |||| ||| ||| |||||||| || |||||| | || || ||||| Sbjct 14504 ATTGAGACATACCACTTGATGTCCCAGAAGTACTTCACTCACGCCTCCCCCACTTTGTTC 14563 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || || | ||| || || ||| | | ||||||||||| | ||| | ||| Sbjct 14564 AATGCCGCTACTCCCCAGCCCCAGCTTGCATCTTGCTTCCTGGTTGACGTGAGCGCAGAC 14623 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 || || || ||||| || || |||||| |||||| ||||||||| | || Sbjct 14624 AGCATTGAGGGTATCTATGACACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGC 14683 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||||||| | || || | || | || || | ||| | || || || | Sbjct 14684 GGTATCGGTCTGAACG--TCCACCGCATTCGCGCTACCGGTTCGTACATTGGTGGAACCA 14741 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 ||||| | || | || || || |||||||| || || || |||||||| ||||| || | Sbjct 14742 ACGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATG 14801 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 | ||||||||||| |||||| || | || ||||||||||| ||||||||||||| Sbjct 14802 TTGACCAGGGTGGTAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACG 14861 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 |||| | | ||||| || || ||||| ||| || ||| | || ||| | || || Sbjct 14862 CCGATGTCTTCGAGTTCCTTGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCC 14921 Query 53658 GTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 ||||||| || ||| ||| |||||| ||| || ||||||||| | || ||| || Sbjct 14922 GTGACCTCTTCTAC-GCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAAC 14980 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 | || ||| || | || || |||||| ||||||||| | |||||||||||| Sbjct 14981 GGTGACTGGACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGAT 15040 Query 53777 GAGTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGAAGAAGGTCA 53834 ||||| ||| | || || |||| |||| ||||||| | |||| ||| Sbjct 15041 GAGTTCGACGCTCTCTACGCGAAGTACGAGCAG--GAGGGCCGTGGCCGCAAGACTATCA 15098 Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894 |||| | || | ||| | || || ||| || ||| ||||| || | || | || Sbjct 15099 AGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCA 15158 Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 || |||||||||| | |||| ||||||| |||||||||||| Sbjct 15159 TGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 15202 >seq1687 Length=21250 Score = 140 bits (154), Expect = 4e-28 Identities = 295/440 (67%), Gaps = 0/440 (0%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||||||||| || || || || |||||||||||||| |||||||| | ||| | Sbjct 1234 CCAGTTCCGATACCATCCGCGCCGTTGATCAGAATCATCGGGACGACAGGCATAAAGACC 1293 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | || ||||| | ||| | || | | | || || | Sbjct 1294 TCGGGCTCAATTTTCTTGCCATCGTCTTCGTTGTATGTTAGTAGTGGCTCATCGGCCGTA 1353 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| || || | | || | ||||||||| | |||||||||| || ||| | Sbjct 1354 TGGAAGATTTTGCGTGCAAAGGGGGACAGGCGAGTGTAGATGTAACGAGCACTGGCACAA 1413 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || || ||||| ||| || |||| || | |||||| ||||| | | ||| | ||| Sbjct 1414 TCATTACCACCTTGAAGTCGACTACCAAAGTTTCCACTAGGCTCTAGGCAGTTGATATTG 1473 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCA 117451 |||| ||| |||||| | || || | || || || || ||| | || || Sbjct 1474 TTGGAGCCAACAAAGGTCTGGGCAAGACCAACGATAGTCTGCTGAAGGGAGACGTCGCCG 1533 Query 117452 TGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGAC 117511 ||||| || || ||| | | || | || ||||||| | ||||||||||||| | Sbjct 1534 TGGTGGTAAGCTGTCATTCCGGATACATGACCTGCCAGCTCAACCACCTTCATGTCCTTC 1593 Query 117512 GTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCC 117571 |||| || || |||| | || |||||||||||||| ||||||| |||||| Sbjct 1594 TTCAGATTACGGCGGAAACAGGTGTGAAGCACCTTGCGCTGACCGGGCTTCAAACCATCG 1653 Query 117572 GCCACGTGAGGGATCGAACG 117591 | ||| |||||||||||| Sbjct 1654 ACAACGGAAGGGATCGAACG 1673 Score = 102 bits (112), Expect = 9e-17 Identities = 200/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Plus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || ||| ||||||| || | ||||| ||| || |||||| || || | ||||| Sbjct 1384 CGAGTGTAGATGTAACGAGCACTGGCACAATCATTACCACCTTGAAGTCGACTACCAAAG 1443 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| ||||| ||| ||||| ||||||| ||| || || |||| || | | Sbjct 1444 TTTCCACTAGGCTCTAGGCAGTTGATATTGTTGGAGCCAACAAAGGTCTGGGCAAGACCA 1503 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 || || || ||| || | || |||||||| || || ||| |||| ||| || Sbjct 1504 ACGATAGTCTGCTGAAGGGAGACGTCGCCGTGGTGGTAAGCTGTCAT-TCCG-GATACAT 1561 Query 152206 --CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAA 152263 || |||| || |||||||||||||| || |||| || || ||||| || || Sbjct 1562 GACCTGCCAGCTCAACCACCTTCATGTCCTTCTTCAGATTACGGCGGAAACAGGTGTGAA 1621 Query 152264 TCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 |||||||||||| || |||||||| || || ||| ||| |||||||| Sbjct 1622 GCACCTTGCGCTGACCGGGCTTCAAACCATCGACAACGGAAGGGATCGAACG 1673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547204214335400