Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq588 181 2e-40 seq1609 122 2e-22 seq346 120 7e-22 seq244 111 4e-19 >seq588 Length=1505 Score = 181 bits (200), Expect = 2e-40 Identities = 154/190 (81%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| ||||||||||||||||||| |||||| | ||||| Sbjct 160 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 219 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||||||||| || || ||||||||||||| || ||||||||| Sbjct 220 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 279 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| || || | |||||||| || ||||| || Sbjct 280 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 339 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 340 TTGCCAGTGA 349 >seq1609 Length=37815 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 13137 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 13078 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 13077 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 13018 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 13017 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12961 Query 211104 AA 211105 || Sbjct 12960 AA 12959 >seq346 Length=34350 Score = 120 bits (132), Expect = 7e-22 Identities = 193/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||| ||||| || ||| ||||| ||||| |||||||| | || Sbjct 15202 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 15146 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| |||||| |||||||| | ||| |||| ||| || || |||||| Sbjct 15145 AGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCG 15086 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || | ||||||||| |||||| | ||||| || || |||||||| Sbjct 15085 GCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATC 15026 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || ||||| ||||| ||||| |||||||| |||| | ||||| ||| || || Sbjct 15025 AGCCAGGCCGGGGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCG 14966 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | ||||| | || ||||| Sbjct 14965 CTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAA 14930 >seq244 Length=29022 Score = 111 bits (122), Expect = 4e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| ||||||| || || | ||||| Sbjct 25077 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 25018 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| || |||||||| || | || |||||||| Sbjct 25017 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 24959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159126410632895