Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1609 138 1e-27 seq588 113 4e-20 seq244 105 6e-18 >seq1609 Length=37815 Score = 138 bits (152), Expect = 1e-27 Identities = 142/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| | Sbjct 13139 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 13080 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||| ||||| | ||||| || |||||| ||| ||| || ||| ||| | Sbjct 13079 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTT-GACGTTG 13021 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 13020 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12961 Query 41852 AAA 41854 ||| Sbjct 12960 AAA 12958 >seq588 Length=1505 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | ||||| || || ||| |||||| || |||||||| || || Sbjct 145 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 204 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 205 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 264 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||| ||||| ||||| || Sbjct 265 ATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTATCGCTGGACTCAAC 323 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || ||||| || || Sbjct 324 CTCAAGGGTGATGGTTTTGCCAGT 347 >seq244 Length=29022 Score = 105 bits (116), Expect = 6e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || || ||||||||| ||||| || || Sbjct 25096 ACCACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 25037 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||||| ||||| | || |||||||||||||||||||| ||||||||||| ||||| | Sbjct 25036 CGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 24977 Query 41752 GGGAACGCTCTCCTTGTCCAT 41772 ||| | | ||||||||| || Sbjct 24976 GGGGATACCCTCCTTGTCTAT 24956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462294043127600