Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1609 138 1e-27
seq588 113 4e-20
seq244 105 6e-18
>seq1609
Length=37815
Score = 138 bits (152), Expect = 1e-27
Identities = 142/183 (78%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| |
Sbjct 13139 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 13080
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||||||||| ||||| | ||||| || |||||| ||| ||| || ||| ||| |
Sbjct 13079 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTT-GACGTTG 13021
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||||||||||| || || | || || || ||||||||||| ||||| |||
Sbjct 13020 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12961
Query 41852 AAA 41854
|||
Sbjct 12960 AAA 12958
>seq588
Length=1505
Score = 113 bits (124), Expect = 4e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || || || | ||||| || || ||| |||||| || |||||||| || ||
Sbjct 145 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 204
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||||||||| ||||| || || ||||| ||||| | |||
Sbjct 205 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 264
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| ||| | | | ||| ||||| ||||| ||
Sbjct 265 ATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTATCGCTGGACTCAAC 323
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | || || ||||| || ||
Sbjct 324 CTCAAGGGTGATGGTTTTGCCAGT 347
>seq244
Length=29022
Score = 105 bits (116), Expect = 6e-18
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || || || || || ||||||||| ||||| || ||
Sbjct 25096 ACCACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 25037
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
||||| ||||| | || |||||||||||||||||||| ||||||||||| ||||| |
Sbjct 25036 CGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 24977
Query 41752 GGGAACGCTCTCCTTGTCCAT 41772
||| | | ||||||||| ||
Sbjct 24976 GGGGATACCCTCCTTGTCTAT 24956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462294043127600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |