Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 4e-31
seq1 150 4e-31
>seq5
Length=559289
Score = 150 bits (166), Expect = 4e-31
Identities = 311/460 (68%), Gaps = 6/460 (1%)
Strand=Plus/Plus
Query 230181 GCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCAT 230240
|||||| || |||| | ||| || ||||| | || || || ||| | ||||
Sbjct 31791 GCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCAT 31850
Query 230241 CTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAG 230300
||| ||||| ||| || ||||||||||||| | | || |||||| | |||
Sbjct 31851 CTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTC 31910
Query 230301 TCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAA 230360
||| |||||||||||||| | |||| | || ||| || | | |||| |
Sbjct 31911 TCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACAT---GAACCA 31967
Query 230361 GCTACC--ATTCGA-GACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGA 230417
| || || | | | ||| | | |||||| || || || | | || ||||
Sbjct 31968 CCGCCCCGATCCTAAGGTGGTTCAGGACATCATTGTTGAGGCCGTCGGCATTGAGCAGGA 32027
Query 230418 GTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACA 230477
|||| || ||||||| |||| || | || ||||||||||| | | || ||| | |
Sbjct 32028 GTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCGA 32087
Query 230478 GTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAA 230537
||||||||| ||||| || |||||| | | || || || || || |||| |||||
Sbjct 32088 GTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTCGGCAACAAGAAGTACTACAA 32147
Query 230538 CTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTT 230597
| ||| |||||||| | || |||||| ||| || || || ||||||||||||||
Sbjct 32148 CGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTT 32207
Query 230598 CGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||| ||||||||| ||||||| |||| | ||||||| |||
Sbjct 32208 CGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGTCATG 32247
>seq1
Length=1003528
Score = 150 bits (166), Expect = 4e-31
Identities = 311/460 (68%), Gaps = 6/460 (1%)
Strand=Plus/Plus
Query 230181 GCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCAT 230240
|||||| || |||| | ||| || ||||| | || || || ||| | ||||
Sbjct 973549 GCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCAT 973608
Query 230241 CTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAG 230300
||| ||||| ||| || ||||||||||||| | | || |||||| | |||
Sbjct 973609 CTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTC 973668
Query 230301 TCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAA 230360
||| |||||||||||||| | |||| | || ||| || | | |||| |
Sbjct 973669 TCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACAT---GAACCA 973725
Query 230361 GCTACC--ATTCGA-GACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGA 230417
| || || | | | ||| | | |||||| || || || | | || ||||
Sbjct 973726 CCGCCCCGATCCTAAGGTGGTTCAGGACATCATTGTTGAGGCCGTCGGCATTGAGCAGGA 973785
Query 230418 GTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACA 230477
|||| || ||||||| |||| || | || ||||||||||| | | || ||| | |
Sbjct 973786 GTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGTGCGA 973845
Query 230478 GTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAA 230537
||||||||| ||||| || |||||| | | || || || || || |||| |||||
Sbjct 973846 GTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTCGGCAACAAGAAGTACTACAA 973905
Query 230538 CTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTT 230597
| ||| |||||||| | || |||||| ||| || || || ||||||||||||||
Sbjct 973906 CGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTT 973965
Query 230598 CGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||| ||||||||| ||||||| |||| | ||||||| |||
Sbjct 973966 CGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGTCATG 974005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057820516783910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |