Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 2e-13
seq1 91.5 2e-13
>seq5
Length=559289
Score = 91.5 bits (100), Expect = 2e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
||||| || |||||||| ||| ||| | |||||||| ||||||||||| |||||
Sbjct 31618 ATATAAGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 31559
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| ||||| || | || || || || | ||| || || | ||
Sbjct 31558 AAGCCGTAGAAGCAACGGGCCTCGGGAATCTGGACCTCTCCACTGAAACGCTCGACAAGG 31499
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393
|| ||||| || || |||||| |||||||| || ||||
Sbjct 31498 TTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCA 31459
Score = 82.4 bits (90), Expect = 8e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||| |||||| ||||| || || | |||||||| | ||| || ||||| ||
Sbjct 31952 AACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 31893
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| |||| || |||||| || || ||||| | ||| || || | |||||| || |||
Sbjct 31892 AAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCA 31833
Query 17075 GAAAAGAATATACCCTCGAC 17094
|| ||||| |||||||||||
Sbjct 31832 GAGAAGAAGATACCCTCGAC 31813
>seq1
Length=1003528
Score = 91.5 bits (100), Expect = 2e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
||||| || |||||||| ||| ||| | |||||||| ||||||||||| |||||
Sbjct 973376 ATATAAGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 973317
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| ||||| || | || || || || | ||| || || | ||
Sbjct 973316 AAGCCGTAGAAGCAACGGGCCTCGGGAATCTGGACCTCTCCACTGAAACGCTCGACAAGG 973257
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393
|| ||||| || || |||||| |||||||| || ||||
Sbjct 973256 TTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCA 973217
Score = 82.4 bits (90), Expect = 8e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||| |||||| ||||| || || | |||||||| | ||| || ||||| ||
Sbjct 973710 AACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 973651
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| |||| || |||||| || || ||||| | ||| || || | |||||| || |||
Sbjct 973650 AAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCA 973591
Query 17075 GAAAAGAATATACCCTCGAC 17094
|| ||||| |||||||||||
Sbjct 973590 GAGAAGAAGATACCCTCGAC 973571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543937384760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |