Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq142 107 2e-18 seq87 107 2e-18 >seq142 Length=51707 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | |||||||||||| || || |||||||||| Sbjct 45477 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 45536 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||||| || || || | ||||| | ||||||||| ||| Sbjct 45537 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 45596 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | | ||||| | ||| Sbjct 45597 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACC 45656 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| || || || || |||||||| |||||||| Sbjct 45657 TCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | ||||||||||||||| |||||||| |||| ||||| | | ||| Sbjct 46004 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 46063 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| || | ||||| | ||||||||| || | || |||||||| Sbjct 46064 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 46123 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| |||||| | || ||| || | ||| ||||| Sbjct 46124 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 46183 Query 21144 TTGCCGGT 21151 ||||| || Sbjct 46184 TTGCCAGT 46191 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| ||||| |||||||||| || || | ||||||||||||| || || Sbjct 45735 GTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 45794 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 || | ||||| | |||||||| ||| | ||| |||||||| |||||| Sbjct 45795 GCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 45847 >seq87 Length=93243 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | |||||||||||| || || |||||||||| Sbjct 6231 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 6172 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||||| || || || | ||||| | ||||||||| ||| Sbjct 6171 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 6112 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | | ||||| | ||| Sbjct 6111 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACC 6052 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| || || || || |||||||| |||||||| Sbjct 6051 TCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | ||||||||||||||| |||||||| |||| ||||| | | ||| Sbjct 5704 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 5645 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| || | ||||| | ||||||||| || | || |||||||| Sbjct 5644 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 5585 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| |||||| | || ||| || | ||| ||||| Sbjct 5584 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 5525 Query 21144 TTGCCGGT 21151 ||||| || Sbjct 5524 TTGCCAGT 5517 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| ||||| |||||||||| || || | ||||||||||||| || || Sbjct 5973 GTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 5914 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 || | ||||| | |||||||| ||| | ||| |||||||| |||||| Sbjct 5913 GCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 5861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257877405012