Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 158 2e-33 seq1 158 2e-33 seq102 125 1e-23 seq3 125 1e-23 >seq5 Length=559289 Score = 158 bits (174), Expect = 2e-33 Identities = 300/436 (69%), Gaps = 23/436 (5%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || |||||||| || ||||| |||||||| || || || || ||||||| Sbjct 31795 CTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTC 31854 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || ||||| | |||||| | || ||||| Sbjct 31855 TGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGT 31914 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 |||||||| || ||| |||||| ||| ||| ||||| || || | | | || ||| Sbjct 31915 GACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCC 31974 Query 125604 GAGTGCAGATCCAGCGATGAAA-AGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 || ||| | || ||| ||||| |||| || ||||| | || || Sbjct 31975 GA-------TCCTAAGGTGGTTCAGGACATCA---TTGTT---GAGGCCGTCGGCATTGA 32021 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAAT 125722 || ||||| || || || | || || | | || |||||||||||| |||||| || Sbjct 32022 GCAGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCAT 32081 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA- 125781 |||||||||||| ||||| || || || || || ||| | | | ||| ||||| Sbjct 32082 GTGCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTG---GTGGCTCTCGGCAACAAGAA 32138 Query 125782 --TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 |||||||| | || ||||| || |||||| ||| || || | || ||||| Sbjct 32139 GTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGAC 32198 Query 125840 CAACTTTTTCGAGAAG 125855 |||||| ||||||||| Sbjct 32199 CAACTTCTTCGAGAAG 32214 >seq1 Length=1003528 Score = 158 bits (174), Expect = 2e-33 Identities = 300/436 (69%), Gaps = 23/436 (5%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || |||||||| || ||||| |||||||| || || || || ||||||| Sbjct 973553 CTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTC 973612 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || ||||| | |||||| | || ||||| Sbjct 973613 TGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGT 973672 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 |||||||| || ||| |||||| ||| ||| ||||| || || | | | || ||| Sbjct 973673 GACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCC 973732 Query 125604 GAGTGCAGATCCAGCGATGAAA-AGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 || ||| | || ||| ||||| |||| || ||||| | || || Sbjct 973733 GA-------TCCTAAGGTGGTTCAGGACATCA---TTGTT---GAGGCCGTCGGCATTGA 973779 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAAT 125722 || ||||| || || || | || || | | || |||||||||||| |||||| || Sbjct 973780 GCAGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCAT 973839 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA- 125781 |||||||||||| ||||| || || || || || ||| | | | ||| ||||| Sbjct 973840 GTGCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTG---GTGGCTCTCGGCAACAAGAA 973896 Query 125782 --TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 |||||||| | || ||||| || |||||| ||| || || | || ||||| Sbjct 973897 GTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGAC 973956 Query 125840 CAACTTTTTCGAGAAG 125855 |||||| ||||||||| Sbjct 973957 CAACTTCTTCGAGAAG 973972 >seq102 Length=78597 Score = 125 bits (138), Expect = 1e-23 Identities = 324/487 (67%), Gaps = 10/487 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || |||||| | ||| ||||| |||| || |||||||| || Sbjct 3921 CAGGGTGGTAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 3862 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || |||| || ||| || || |||| || ||| | ||| Sbjct 3861 GTCTTCGAGTTCCTTGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCCGTGAC 3802 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || | ||| || ||| | |||||||||||||| | | |||||| Sbjct 3801 CTCTTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTG-- 3744 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || | || ||| || | | ||||| ||| | ||| || || || ||| Sbjct 3743 -ACTGGACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAG 3685 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || || || ||| || |||||||| |||||||| || |||| | || | || Sbjct 3684 TTCGACGCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACTA-TCAAGGC 3626 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | ||||| | ||||||| |||||||| | || | ||| | Sbjct 3625 TC-AGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGC 3567 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||||| | || || || ||||| || |||| || || ||| Sbjct 3566 TCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCT 3507 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| |||||||| || ||||| |||||| | || || ||| ||| || ||| | Sbjct 3506 CCAACCTGTGCACTGAGATTGTCGAGTACAGTGCCCCTGATGAGGTGGCTGTCTGCAACC 3447 Query 97351 TGGCATC 97357 |||| || Sbjct 3446 TGGCTTC 3440 >seq3 Length=875381 Score = 125 bits (138), Expect = 1e-23 Identities = 324/487 (67%), Gaps = 10/487 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || |||||| | ||| ||||| |||| || |||||||| || Sbjct 871476 CAGGGTGGTAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 871535 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || |||| || ||| || || |||| || ||| | ||| Sbjct 871536 GTCTTCGAGTTCCTTGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCCGTGAC 871595 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || | ||| || ||| | |||||||||||||| | | |||||| Sbjct 871596 CTCTTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTG-- 871653 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || | || ||| || | | ||||| ||| | ||| || || || ||| Sbjct 871654 -ACTGGACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAG 871712 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || || || ||| || |||||||| |||||||| || |||| | || | || Sbjct 871713 TTCGACGCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACTA-TCAAGGC 871771 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | ||||| | ||||||| |||||||| | || | ||| | Sbjct 871772 TC-AGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGC 871830 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||||| | || || || ||||| || |||| || || ||| Sbjct 871831 TCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCT 871890 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| |||||||| || ||||| |||||| | || || ||| ||| || ||| | Sbjct 871891 CCAACCTGTGCACTGAGATTGTCGAGTACAGTGCCCCTGATGAGGTGGCTGTCTGCAACC 871950 Query 97351 TGGCATC 97357 |||| || Sbjct 871951 TGGCTTC 871957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056819347320