Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq142 91.5 1e-13 seq87 91.5 1e-13 >seq142 Length=51707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/189 (72%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||| ||| | ||| || |||||||| | ||||||||| | || || || ||||| Sbjct 46007 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCG--AAAGGGTGCGACCATCCT 46064 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || || | ||||| | | ||||| || ||||||||||| || ||||| | Sbjct 46065 CAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 46124 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGT 94974 || || | ||||||| | ||| ||| || || ||| || || |||| |||||||| Sbjct 46125 GGATCTTGGACTTGACGTTGTCGATAGTATC-GC-TGGACTCAACCTCAAGGGTGATGGT 46182 Query 94975 TTTTCCAGT 94983 ||| ||||| Sbjct 46183 TTTGCCAGT 46191 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850 |||||||||| ||| | ||| || ||||| || | ||||| || | ||| || | Sbjct 45489 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 45548 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||||||||| || || | ||||| | | ||||| || || ||||| || || | Sbjct 45549 --TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCT 45606 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || || | ||||||| | | | || || | | ||||| || | |||| Sbjct 45607 TGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGA 45666 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || | ||| || |||||||| ||||| Sbjct 45667 TGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703 >seq87 Length=93243 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/189 (72%), Gaps = 8/189 (4%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||| ||| | ||| || |||||||| | ||||||||| | || || || ||||| Sbjct 5701 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCG--AAAGGGTGCGACCATCCT 5644 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || || | ||||| | | ||||| || ||||||||||| || ||||| | Sbjct 5643 CAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 5584 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGT 94974 || || | ||||||| | ||| ||| || || ||| || || |||| |||||||| Sbjct 5583 GGATCTTGGACTTGACGTTGTCGATAGTATC-GC-TGGACTCAACCTCAAGGGTGATGGT 5526 Query 94975 TTTTCCAGT 94983 ||| ||||| Sbjct 5525 TTTGCCAGT 5517 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850 |||||||||| ||| | ||| || ||||| || | ||||| || | ||| || | Sbjct 6219 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 6160 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||||||||| || || | ||||| | | ||||| || || ||||| || || | Sbjct 6159 --TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCT 6102 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || || | ||||||| | | | || || | | ||||| || | |||| Sbjct 6101 TGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGA 6042 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || | ||| || |||||||| ||||| Sbjct 6041 TGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289759864520