Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq142 91.5 1e-13
seq87 91.5 1e-13
>seq142
Length=51707
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/189 (72%), Gaps = 8/189 (4%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||| ||| | ||| || |||||||| | ||||||||| | || || || |||||
Sbjct 46007 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCG--AAAGGGTGCGACCATCCT 46064
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||| || || | ||||| | | ||||| || ||||||||||| || ||||| |
Sbjct 46065 CAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 46124
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGT 94974
|| || | ||||||| | ||| ||| || || ||| || || |||| ||||||||
Sbjct 46125 GGATCTTGGACTTGACGTTGTCGATAGTATC-GC-TGGACTCAACCTCAAGGGTGATGGT 46182
Query 94975 TTTTCCAGT 94983
||| |||||
Sbjct 46183 TTTGCCAGT 46191
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850
|||||||||| ||| | ||| || ||||| || | ||||| || | ||| || |
Sbjct 45489 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 45548
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||||||||| || || | ||||| | | ||||| || || ||||| || || |
Sbjct 45549 --TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCT 45606
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || || | ||||||| | | | || || | | ||||| || | ||||
Sbjct 45607 TGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGA 45666
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || | ||| || |||||||| |||||
Sbjct 45667 TGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703
>seq87
Length=93243
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/189 (72%), Gaps = 8/189 (4%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||| ||| | ||| || |||||||| | ||||||||| | || || || |||||
Sbjct 5701 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCG--AAAGGGTGCGACCATCCT 5644
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||| || || | ||||| | | ||||| || ||||||||||| || ||||| |
Sbjct 5643 CAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 5584
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGT 94974
|| || | ||||||| | ||| ||| || || ||| || || |||| ||||||||
Sbjct 5583 GGATCTTGGACTTGACGTTGTCGATAGTATC-GC-TGGACTCAACCTCAAGGGTGATGGT 5526
Query 94975 TTTTCCAGT 94983
||| |||||
Sbjct 5525 TTTGCCAGT 5517
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850
|||||||||| ||| | ||| || ||||| || | ||||| || | ||| || |
Sbjct 6219 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 6160
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||||||||| || || | ||||| | | ||||| || || ||||| || || |
Sbjct 6159 --TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCT 6102
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || || | ||||||| | | | || || | | ||||| || | ||||
Sbjct 6101 TGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGA 6042
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || | ||| || |||||||| |||||
Sbjct 6041 TGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289759864520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |