Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 seq1 109 5e-19 >seq5 Length=559289 Score = 109 bits (120), Expect = 5e-19 Identities = 247/367 (67%), Gaps = 17/367 (5%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| | || || ||| | Sbjct 32232 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTC 32173 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | || |||| | | ||| | || ||| | | | || ||| Sbjct 32172 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAG 32113 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| ||||||||| | ||| || |||||||| | || | Sbjct 32112 GCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTG-GAGTTCATGCCAAGCAGAC 32054 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878 || || | ||| | |||| ||| |||| |||||| |||| || || |||| | | Sbjct 32053 CGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGT 31994 Query 119879 ACTCAA-CACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATA 119937 || || |||||| | | || | | | |||| | | |||| | | | Sbjct 31993 CCTGAACCACCTTAGGATCGGGGCGGTGGTTCATGT-GGGA-----------GAACAGCA 31946 Query 119938 GACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCA 119997 |||| || ||||| ||||| || || ||||| | || || || |||||| | |||||| Sbjct 31945 GACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCA 31886 Query 119998 AGCCGGG 120004 ||| || Sbjct 31885 GGCCAGG 31879 >seq1 Length=1003528 Score = 109 bits (120), Expect = 5e-19 Identities = 247/367 (67%), Gaps = 17/367 (5%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| | || || ||| | Sbjct 973990 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTC 973931 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | || |||| | | ||| | || ||| | | | || ||| Sbjct 973930 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAG 973871 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| ||||||||| | ||| || |||||||| | || | Sbjct 973870 GCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTG-GAGTTCATGCCAAGCAGAC 973812 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878 || || | ||| | |||| ||| |||| |||||| |||| || || |||| | | Sbjct 973811 CGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGT 973752 Query 119879 ACTCAA-CACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATA 119937 || || |||||| | | || | | | |||| | | |||| | | | Sbjct 973751 CCTGAACCACCTTAGGATCGGGGCGGTGGTTCATGT-GGGA-----------GAACAGCA 973704 Query 119938 GACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCA 119997 |||| || ||||| ||||| || || ||||| | || || || |||||| | |||||| Sbjct 973703 GACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCA 973644 Query 119998 AGCCGGG 120004 ||| || Sbjct 973643 GGCCAGG 973637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660862297040