Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 5e-19
seq1 109 5e-19
>seq5
Length=559289
Score = 109 bits (120), Expect = 5e-19
Identities = 247/367 (67%), Gaps = 17/367 (5%)
Strand=Plus/Minus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || || ||||| || || || || || |||||||| | || || ||| |
Sbjct 32232 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTC 32173
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | || |||| | | ||| | || ||| | | | || |||
Sbjct 32172 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAG 32113
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
|| || || || ||||||||||| ||||||||| | ||| || |||||||| | || |
Sbjct 32112 GCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTG-GAGTTCATGCCAAGCAGAC 32054
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878
|| || | ||| | |||| ||| |||| |||||| |||| || || |||| | |
Sbjct 32053 CGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGT 31994
Query 119879 ACTCAA-CACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATA 119937
|| || |||||| | | || | | | |||| | | |||| | | |
Sbjct 31993 CCTGAACCACCTTAGGATCGGGGCGGTGGTTCATGT-GGGA-----------GAACAGCA 31946
Query 119938 GACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCA 119997
|||| || ||||| ||||| || || ||||| | || || || |||||| | ||||||
Sbjct 31945 GACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCA 31886
Query 119998 AGCCGGG 120004
||| ||
Sbjct 31885 GGCCAGG 31879
>seq1
Length=1003528
Score = 109 bits (120), Expect = 5e-19
Identities = 247/367 (67%), Gaps = 17/367 (5%)
Strand=Plus/Minus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || || ||||| || || || || || |||||||| | || || ||| |
Sbjct 973990 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTC 973931
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | || |||| | | ||| | || ||| | | | || |||
Sbjct 973930 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAG 973871
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
|| || || || ||||||||||| ||||||||| | ||| || |||||||| | || |
Sbjct 973870 GCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTG-GAGTTCATGCCAAGCAGAC 973812
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878
|| || | ||| | |||| ||| |||| |||||| |||| || || |||| | |
Sbjct 973811 CGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGCCTCAACAATGATGT 973752
Query 119879 ACTCAA-CACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATA 119937
|| || |||||| | | || | | | |||| | | |||| | | |
Sbjct 973751 CCTGAACCACCTTAGGATCGGGGCGGTGGTTCATGT-GGGA-----------GAACAGCA 973704
Query 119938 GACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCA 119997
|||| || ||||| ||||| || || ||||| | || || || |||||| | ||||||
Sbjct 973703 GACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCA 973644
Query 119998 AGCCGGG 120004
||| ||
Sbjct 973643 GGCCAGG 973637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478660862297040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |