Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq20 111 1e-19
seq142 89.7 3e-13
seq87 89.7 3e-13
>seq20
Length=549701
Score = 111 bits (122), Expect = 1e-19
Identities = 202/293 (69%), Gaps = 12/293 (4%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | | || | || ||||||||||| ||||| |||||||
Sbjct 376042 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 375985
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314
|||| ||||| | ||||| |||||| || || || | ||| | || ||| |
Sbjct 375984 TTAAGACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCCCTCAGCCGTCCTCCT 375929
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
|||| | | || || ||||| | ||||||||| || ||| | | | | | |
Sbjct 375928 GCCTATCTCATCAAGTACTTCGGATTCGAACTTGGTGCCCAGGCCAATGCTAAGCCCTCC 375869
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| || | ||| ||||||| || || || | ||||||| ||||||| || ||
Sbjct 375868 GACGACCGTTGGATCATTAACGGTTCTCACGACGCCCCCAAGCTTCAGGACTACCTCGAT 375809
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || |||||| ||||| || | | ||| | ||||| ||||||||
Sbjct 375808 GGCTTCATCTCCAAGTTCGTGCTCTGCAAGAAGTGCAAGAACCCCGAGACCGA 375756
>seq142
Length=51707
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| || | || ||||||||||| || |||||| |||||| || ||||| || || ||
Sbjct 45477 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 45536
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | |||| |||| || | || || || || || || || || || || |||| |||
Sbjct 45537 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 45596
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || |||||| || || ||| || || | | |||||| || || ||
Sbjct 45597 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACC 45656
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | ||| || || || || ||||| || || || || || |||||
Sbjct 45657 TCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703
>seq87
Length=93243
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| || | || ||||||||||| || |||||| |||||| || ||||| || || ||
Sbjct 6231 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 6172
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | |||| |||| || | || || || || || || || || || || |||| |||
Sbjct 6171 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 6112
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || |||||| || || ||| || || | | |||||| || || ||
Sbjct 6111 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACC 6052
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | ||| || || || || ||||| || || || || || |||||
Sbjct 6051 TCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946150882567
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |