Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq5 149 1e-30
seq1 149 1e-30
seq134 104 5e-17
>seq5
Length=559289
Score = 149 bits (164), Expect = 1e-30
Identities = 275/402 (68%), Gaps = 6/402 (1%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| ||
Sbjct 32210 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 32151
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | ||| | ||| || || || | | |||||| || || ||||| |
Sbjct 32150 GCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATG 32091
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
|||| | ||| || | ||||||||||||| || || || |||| || ||| | |
Sbjct 32090 TACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGG 32031
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGCCAGAGAC 251799
|| |||| || || | || ||||| | | || ||| ||||| | ||
Sbjct 32030 AACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCCTGAACCACCTTAG---GATCG 31974
Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859
| || | || | ||| |||| || | | || | ||| |||||||||||
Sbjct 31973 GGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCA 31914
Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919
||| ||| | ||||||||| | | |||||||||||||| ||||| ||| | ||||||
Sbjct 31913 CGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAG 31854
Query 251920 AAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
||||| | | || || |||||||| | | ||||||||||
Sbjct 31853 AAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 31812
>seq1
Length=1003528
Score = 149 bits (164), Expect = 1e-30
Identities = 275/402 (68%), Gaps = 6/402 (1%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| ||
Sbjct 973968 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 973909
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | ||| | ||| || || || | | |||||| || || ||||| |
Sbjct 973908 GCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATG 973849
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
|||| | ||| || | ||||||||||||| || || || |||| || ||| | |
Sbjct 973848 TACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGG 973789
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGCCAGAGAC 251799
|| |||| || || | || ||||| | | || ||| ||||| | ||
Sbjct 973788 AACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCCTGAACCACCTTAG---GATCG 973732
Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859
| || | || | ||| |||| || | | || | ||| |||||||||||
Sbjct 973731 GGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCA 973672
Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919
||| ||| | ||||||||| | | |||||||||||||| ||||| ||| | ||||||
Sbjct 973671 CGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAG 973612
Query 251920 AAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
||||| | | || || |||||||| | | ||||||||||
Sbjct 973611 AAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 973570
>seq134
Length=77790
Score = 104 bits (114), Expect = 5e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403
||||| || || || |||| |||||| || || || |||| ||||||||||| ||
Sbjct 4817 AGGTGTTGACCTTTGCAACTGCACTTTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAA 4876
Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
| || | ||| | ||||||||||| | || || |||||| |||| ||||| || |
Sbjct 4877 CCAGACTCACCTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 4936
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|| |||| ||| || ||||| || || |||| ||||| || || || || ||
Sbjct 4937 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAA 4996
Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|||||| | ||| || || || |||||||| |||||||
Sbjct 4997 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 5038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027833415526137
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |