Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5 149 1e-30 seq1 149 1e-30 seq134 104 5e-17 >seq5 Length=559289 Score = 149 bits (164), Expect = 1e-30 Identities = 275/402 (68%), Gaps = 6/402 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| || Sbjct 32210 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 32151 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || || ||||| | Sbjct 32150 GCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATG 32091 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | ||| || | ||||||||||||| || || || |||| || ||| | | Sbjct 32090 TACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGG 32031 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGCCAGAGAC 251799 || |||| || || | || ||||| | | || ||| ||||| | || Sbjct 32030 AACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCCTGAACCACCTTAG---GATCG 31974 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859 | || | || | ||| |||| || | | || | ||| ||||||||||| Sbjct 31973 GGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCA 31914 Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919 ||| ||| | ||||||||| | | |||||||||||||| ||||| ||| | |||||| Sbjct 31913 CGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAG 31854 Query 251920 AAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||||| | | || || |||||||| | | |||||||||| Sbjct 31853 AAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 31812 >seq1 Length=1003528 Score = 149 bits (164), Expect = 1e-30 Identities = 275/402 (68%), Gaps = 6/402 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| || Sbjct 973968 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 973909 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || || ||||| | Sbjct 973908 GCGTTGTAGTACTTCTTGTTGCCGAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATG 973849 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | ||| || | ||||||||||||| || || || |||| || ||| | | Sbjct 973848 TACTCGCACATGAGCTTGGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGG 973789 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGCCAGAGAC 251799 || |||| || || | || ||||| | | || ||| ||||| | || Sbjct 973788 AACTCCTGCTCAATGCCGACGGCCTCAACAATGATGTCCTGAACCACCTTAG---GATCG 973732 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859 | || | || | ||| |||| || | | || | ||| ||||||||||| Sbjct 973731 GGGCGGTGGTTCATGTGGGAGAACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCA 973672 Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919 ||| ||| | ||||||||| | | |||||||||||||| ||||| ||| | |||||| Sbjct 973671 CGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAG 973612 Query 251920 AAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||||| | | || || |||||||| | | |||||||||| Sbjct 973611 AAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 973570 >seq134 Length=77790 Score = 104 bits (114), Expect = 5e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||||| || || || |||| |||||| || || || |||| ||||||||||| || Sbjct 4817 AGGTGTTGACCTTTGCAACTGCACTTTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAA 4876 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | ||| | ||||||||||| | || || |||||| |||| ||||| || | Sbjct 4877 CCAGACTCACCTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 4936 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| ||| || ||||| || || |||| ||||| || || || || || Sbjct 4937 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAA 4996 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || |||||||| ||||||| Sbjct 4997 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 5038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833415526137