Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5 156 8e-33 seq1 156 8e-33 seq142 143 5e-29 seq87 143 5e-29 seq86 129 1e-24 seq174 91.5 3e-13 seq8 91.5 3e-13 >seq5 Length=559289 Score = 156 bits (172), Expect = 8e-33 Identities = 298/438 (68%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 32247 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 32188 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 32187 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 32128 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||||||||||| || ||| || | ||||| Sbjct 32127 GAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTT 32068 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || | |||||| | ||||| || ||| |||| || || |||| || Sbjct 32067 CATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGC 32008 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAG---GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || | | |||| || ||||| | | | || | | |||| | | || | Sbjct 32007 CTCAACAATGATGTCCTGAACCACCTTAGGATCGGGGCGGTGGTTC---ATGTGGGAGAA 31951 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 ||| || | || | |||||| |||||||| || ||| | ||||||||| || Sbjct 31950 CAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAA 31891 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 | ||| || ||||| || || || || |||||||| |||| | ||| || || || Sbjct 31890 AGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGA 31831 Query 10352 GAACAGAAGACCCTCCAC 10369 ||| | | |||||| || Sbjct 31830 GAAGAAGATACCCTCGAC 31813 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| | |||| ||| |||||| Sbjct 31501 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAAATGAAG 31442 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||||| |||||||| | ||||||| | ||||| | ||| | | | Sbjct 31441 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 31382 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||| | ||| |||||||||||||||| || Sbjct 31381 TCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTG 31338 >seq1 Length=1003528 Score = 156 bits (172), Expect = 8e-33 Identities = 298/438 (68%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 974005 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 973946 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 973945 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 973886 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||||||||||| || ||| || | ||||| Sbjct 973885 GAGAGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATGAGCTTGGAGTT 973826 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || | |||||| | ||||| || ||| |||| || || |||| || Sbjct 973825 CATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTAAGGAACTCCTGCTCAATGCCGACGGC 973766 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAG---GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || | | |||| || ||||| | | | || | | |||| | | || | Sbjct 973765 CTCAACAATGATGTCCTGAACCACCTTAGGATCGGGGCGGTGGTTC---ATGTGGGAGAA 973709 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 ||| || | || | |||||| |||||||| || ||| | ||||||||| || Sbjct 973708 CAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAA 973649 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 | ||| || ||||| || || || || |||||||| |||| | ||| || || || Sbjct 973648 AGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGA 973589 Query 10352 GAACAGAAGACCCTCCAC 10369 ||| | | |||||| || Sbjct 973588 GAAGAAGATACCCTCGAC 973571 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| | |||| ||| |||||| Sbjct 973259 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAAATGAAG 973200 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||||| |||||||| | ||||||| | ||||| | ||| | | | Sbjct 973199 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 973140 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||| | ||| |||||||||||||||| || Sbjct 973139 TCCTCAGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTG 973096 >seq142 Length=51707 Score = 143 bits (158), Expect = 5e-29 Identities = 157/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| ||||||||||||||||| || Sbjct 45989 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 46048 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 46049 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 46108 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | ||||||| ||||| || || ||| || || || Sbjct 46109 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATC-GCTGGACTCAAC 46167 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||||||| || |||| Sbjct 46168 CTCAAGGGTGATGGTTTTGCCAGTGA 46193 >seq87 Length=93243 Score = 143 bits (158), Expect = 5e-29 Identities = 157/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| ||||||||||||||||| || Sbjct 5719 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAA 5660 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 5659 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 5600 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || |||||||| || ||||| | ||||||| ||||| || || |||| | || || Sbjct 5599 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATC-GCTGGACTCAAC 5541 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||||||| || |||| Sbjct 5540 CTCAAGGGTGATGGTTTTGCCAGTGA 5515 >seq86 Length=94082 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 12374 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 12433 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| ||||| || || ||||| | ||||||| ||| Sbjct 12434 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 12493 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 12494 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 12552 >seq174 Length=17491 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/208 (72%), Gaps = 14/208 (7%) Strand=Plus/Minus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGT--TCGTC 225493 ||| ||| |||||||||| ||||||||||| || || | ||| || || || Sbjct 13420 GCAGACTTCGTCAAGGAAACCAGAGTCGTGACTGACGATCA-----GACTGGTGATC-TC 13367 Query 225494 AG---GC-CCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTG 225548 || || |||| |||| | | || ||||| ||||| ||||||| |||||| | Sbjct 13366 AGTGTGCGCCTTCAGGTAC-TCCTGCAGCCACTTAACGTTTGCCACGTCCAAGTGGTTAG 13308 Query 225549 TAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCT 225608 ||||||||||||| || || | ||||| | ||| || || || | | || ||||| Sbjct 13307 TAGGTTCGTCCAGCAGGAGCACATCAGCCTTCTGGAGCATAGCACGGGCCAAAGCCAGCT 13248 Query 225609 TCATTTTCCAGCCCCCGGACAGGGAGCC 225636 |||| |||||||| |||||||||||||| Sbjct 13247 TCATCTTCCAGCCACCGGACAGGGAGCC 13220 >seq8 Length=351713 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/208 (72%), Gaps = 14/208 (7%) Strand=Plus/Plus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGT--TCGTC 225493 ||| ||| |||||||||| ||||||||||| || || | ||| || || || Sbjct 342331 GCAGACTTCGTCAAGGAAACCAGAGTCGTGACTGACGATCA-----GACTGGTGATC-TC 342384 Query 225494 AG---GC-CCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTG 225548 || || |||| |||| | | || ||||| ||||| ||||||| |||||| | Sbjct 342385 AGTGTGCGCCTTCAGGTAC-TCCTGCAGCCACTTAACGTTTGCCACGTCCAAGTGGTTAG 342443 Query 225549 TAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCT 225608 ||||||||||||| || || | ||||| | ||| || || || | | || ||||| Sbjct 342444 TAGGTTCGTCCAGCAGGAGCACATCAGCCTTCTGGAGCATAGCACGGGCCAAAGCCAGCT 342503 Query 225609 TCATTTTCCAGCCCCCGGACAGGGAGCC 225636 |||| |||||||| |||||||||||||| Sbjct 342504 TCATCTTCCAGCCACCGGACAGGGAGCC 342531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619439288040