Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq86 116 9e-21 seq142 114 3e-20 seq87 114 3e-20 >seq86 Length=94082 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || ||||| ||||||||| Sbjct 12374 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 12433 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || | || || || || ||||||||||| || | || ||||| || Sbjct 12434 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 12493 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 12494 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 12552 >seq142 Length=51707 Score = 114 bits (126), Expect = 3e-20 Identities = 145/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||||||||| | ||| || |||||||| || | || || || |||||| Sbjct 45513 TCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAG 45572 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || |||||||| || || ||| || || || || |||||||| || | || ||| Sbjct 45573 ATAAGACGCTGCTG---GTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 45629 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| |||| || || ||||| ||||| ||||| || |||| |||| Sbjct 45630 TTGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTC 45686 Query 288457 TTGACGAATATCTGCAT 288473 ||||| || || ||||| Sbjct 45687 TTGACAAAGATTTGCAT 45703 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/223 (70%), Gaps = 12/223 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| || || || ||||||||||| | | Sbjct 45705 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAG 45764 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || |||||||| || | || || || |||||||| ||||| || || || ||| Sbjct 45765 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTG---GTCGGGG 45821 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || |||||||| || | || ||||| || || | ||| |||| Sbjct 45822 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTC--- 45878 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || ||||| ||||| ||||| || || || ||||| |||| Sbjct 45879 TCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 45921 >seq87 Length=93243 Score = 114 bits (126), Expect = 3e-20 Identities = 145/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||||||||| | ||| || |||||||| || | || || || |||||| Sbjct 6195 TCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAG 6136 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || |||||||| || || ||| || || || || |||||||| || | || ||| Sbjct 6135 ATAAGACGCTGCTG---GTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 6079 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| |||| || || ||||| ||||| ||||| || |||| |||| Sbjct 6078 TTGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTC 6022 Query 288457 TTGACGAATATCTGCAT 288473 ||||| || || ||||| Sbjct 6021 TTGACAAAGATTTGCAT 6005 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/223 (70%), Gaps = 12/223 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| || || || ||||||||||| | | Sbjct 6003 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAG 5944 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || |||||||| || | || || || |||||||| ||||| || || || ||| Sbjct 5943 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTG---GTCGGGG 5887 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || |||||||| || | || ||||| || || | ||| |||| Sbjct 5886 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTC--- 5830 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || ||||| ||||| ||||| || || || ||||| |||| Sbjct 5829 TCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 5787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179650515619246