Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq86 116 9e-21
seq142 114 3e-20
seq87 114 3e-20
>seq86
Length=94082
Score = 116 bits (128), Expect = 9e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| || ||||| || || || | || ||||| |||||||||
Sbjct 12374 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 12433
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || | || || || || ||||||||||| || | || ||||| ||
Sbjct 12434 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 12493
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||| || || ||||| || ||||| |||||||||||
Sbjct 12494 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 12552
>seq142
Length=51707
Score = 114 bits (126), Expect = 3e-20
Identities = 145/197 (74%), Gaps = 12/197 (6%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||||||||| | ||| || |||||||| || | || || || ||||||
Sbjct 45513 TCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAG 45572
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| |||||||| || || ||| || || || || |||||||| || | || |||
Sbjct 45573 ATAAGACGCTGCTG---GTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 45629
Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || | ||| |||| || || ||||| ||||| ||||| || |||| ||||
Sbjct 45630 TTGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTC 45686
Query 288457 TTGACGAATATCTGCAT 288473
||||| || || |||||
Sbjct 45687 TTGACAAAGATTTGCAT 45703
Score = 98.7 bits (108), Expect = 2e-15
Identities = 157/223 (70%), Gaps = 12/223 (5%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| ||| || || || ||||||||||| | |
Sbjct 45705 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAG 45764
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || |||||||| || | || || || |||||||| ||||| || || || |||
Sbjct 45765 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTG---GTCGGGG 45821
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420
|| || || || |||||||| || | || ||||| || || | ||| ||||
Sbjct 45822 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTC--- 45878
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|| || ||||| ||||| ||||| || || || ||||| ||||
Sbjct 45879 TCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 45921
>seq87
Length=93243
Score = 114 bits (126), Expect = 3e-20
Identities = 145/197 (74%), Gaps = 12/197 (6%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||||||||| | ||| || |||||||| || | || || || ||||||
Sbjct 6195 TCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAG 6136
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| |||||||| || || ||| || || || || |||||||| || | || |||
Sbjct 6135 ATAAGACGCTGCTG---GTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 6079
Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || | ||| |||| || || ||||| ||||| ||||| || |||| ||||
Sbjct 6078 TTGTCAATGGTATCTGAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTC 6022
Query 288457 TTGACGAATATCTGCAT 288473
||||| || || |||||
Sbjct 6021 TTGACAAAGATTTGCAT 6005
Score = 98.7 bits (108), Expect = 2e-15
Identities = 157/223 (70%), Gaps = 12/223 (5%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| ||| || || || ||||||||||| | |
Sbjct 6003 CCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAG 5944
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || |||||||| || | || || || |||||||| ||||| || || || |||
Sbjct 5943 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTG---GTCGGGG 5887
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420
|| || || || |||||||| || | || ||||| || || | ||| ||||
Sbjct 5886 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTC--- 5830
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|| || ||||| ||||| ||||| || || || ||||| ||||
Sbjct 5829 TCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 5787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179650515619246
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |