Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq5 176 4e-39 seq1 176 4e-39 seq86 87.8 2e-12 >seq5 Length=559289 Score = 176 bits (194), Expect = 4e-39 Identities = 308/446 (69%), Gaps = 23/446 (5%) Strand=Plus/Plus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| |||||||| | || || || ||| || ||| ||||||| | Sbjct 31796 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 31855 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 |||| | | ||| | ||||| |||||||| ||| ||||||| |||| || || | Sbjct 31856 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 31915 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575 |||| || || ||||| ||||| || || || || | ||| || | | ||| Sbjct 31916 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 31975 Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632 | || ||| | ||||| || |||| ||||| || | || || Sbjct 31976 ATCCTAAGGTGGTTCAGGACATCAT--------TGTT----GAGGCCGTCGGCATTGAGC 32023 Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692 ||||||| |||| | ||| || || || ||||| ||||||||| | || ||||| Sbjct 32024 AGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGT 32083 Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751 |||||||||||||||| || || || || ||| ||||| ||| |||| | | |||||| Sbjct 32084 GCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTC-GGCAACAAGAAGTAC 32142 Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811 | ||||||| ||| || || || || ||| | ||| || || | |||||||||||| Sbjct 32143 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAAC 32202 Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||||||||| ||||| || || Sbjct 32203 TTCTTCGAGAAGCGTGTCGGTGACTA 32228 >seq1 Length=1003528 Score = 176 bits (194), Expect = 4e-39 Identities = 308/446 (69%), Gaps = 23/446 (5%) Strand=Plus/Plus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| |||||||| | || || || ||| || ||| ||||||| | Sbjct 973554 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 973613 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 |||| | | ||| | ||||| |||||||| ||| ||||||| |||| || || | Sbjct 973614 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 973673 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575 |||| || || ||||| ||||| || || || || | ||| || | | ||| Sbjct 973674 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 973733 Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632 | || ||| | ||||| || |||| ||||| || | || || Sbjct 973734 ATCCTAAGGTGGTTCAGGACATCAT--------TGTT----GAGGCCGTCGGCATTGAGC 973781 Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692 ||||||| |||| | ||| || || || ||||| ||||||||| | || ||||| Sbjct 973782 AGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGT 973841 Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751 |||||||||||||||| || || || || ||| ||||| ||| |||| | | |||||| Sbjct 973842 GCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTC-GGCAACAAGAAGTAC 973900 Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811 | ||||||| ||| || || || || ||| | ||| || || | |||||||||||| Sbjct 973901 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAAC 973960 Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||||||||| ||||| || || Sbjct 973961 TTCTTCGAGAAGCGTGTCGGTGACTA 973986 >seq86 Length=94082 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 12372 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 12431 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| ||||| || || || || || || || || | || || || | ||| Sbjct 12432 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATC-CTGGATCTTGGTCTTGACGTTG 12490 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 12491 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 12549 Query 138603 AAAA 138606 ||| Sbjct 12550 GAAA 12553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260805757040