Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq5 176 4e-39
seq1 176 4e-39
seq86 87.8 2e-12
>seq5
Length=559289
Score = 176 bits (194), Expect = 4e-39
Identities = 308/446 (69%), Gaps = 23/446 (5%)
Strand=Plus/Plus
Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461
|||| ||||||||| |||||||| | || || || ||| || ||| ||||||| |
Sbjct 31796 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 31855
Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521
|||| | | ||| | ||||| |||||||| ||| ||||||| |||| || || |
Sbjct 31856 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 31915
Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575
|||| || || ||||| ||||| || || || || | ||| || | | |||
Sbjct 31916 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 31975
Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632
| || ||| | ||||| || |||| ||||| || | || ||
Sbjct 31976 ATCCTAAGGTGGTTCAGGACATCAT--------TGTT----GAGGCCGTCGGCATTGAGC 32023
Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692
||||||| |||| | ||| || || || ||||| ||||||||| | || |||||
Sbjct 32024 AGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGT 32083
Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751
|||||||||||||||| || || || || ||| ||||| ||| |||| | | ||||||
Sbjct 32084 GCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTC-GGCAACAAGAAGTAC 32142
Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811
| ||||||| ||| || || || || ||| | ||| || || | ||||||||||||
Sbjct 32143 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAAC 32202
Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| ||||||||||| ||||| || ||
Sbjct 32203 TTCTTCGAGAAGCGTGTCGGTGACTA 32228
>seq1
Length=1003528
Score = 176 bits (194), Expect = 4e-39
Identities = 308/446 (69%), Gaps = 23/446 (5%)
Strand=Plus/Plus
Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461
|||| ||||||||| |||||||| | || || || ||| || ||| ||||||| |
Sbjct 973554 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCT 973613
Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521
|||| | | ||| | ||||| |||||||| ||| ||||||| |||| || || |
Sbjct 973614 GGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAACGAGCTGATCTCTCGTG 973673
Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575
|||| || || ||||| ||||| || || || || | ||| || | | |||
Sbjct 973674 ACGAGGGTCTCCACACTGACTTCGCCTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 973733
Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632
| || ||| | ||||| || |||| ||||| || | || ||
Sbjct 973734 ATCCTAAGGTGGTTCAGGACATCAT--------TGTT----GAGGCCGTCGGCATTGAGC 973781
Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692
||||||| |||| | ||| || || || ||||| ||||||||| | || |||||
Sbjct 973782 AGGAGTTCCTTACTGACGCTCTTCCCTGCGGTCTGCTTGGCATGAACTCCAAGCTCATGT 973841
Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751
|||||||||||||||| || || || || ||| ||||| ||| |||| | | ||||||
Sbjct 973842 GCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCTCTC-GGCAACAAGAAGTAC 973900
Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811
| ||||||| ||| || || || || ||| | ||| || || | ||||||||||||
Sbjct 973901 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAAC 973960
Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| ||||||||||| ||||| || ||
Sbjct 973961 TTCTTCGAGAAGCGTGTCGGTGACTA 973986
>seq86
Length=94082
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || |||||||| || || |||| |||
Sbjct 12372 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 12431
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| || ||||| ||||| || || || || || || || || | || || || | |||
Sbjct 12432 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATC-CTGGATCTTGGTCTTGACGTTG 12490
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 12491 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 12549
Query 138603 AAAA 138606
|||
Sbjct 12550 GAAA 12553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260805757040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |