Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq142 107 2e-18
seq87 107 2e-18
seq86 104 2e-17
>seq142
Length=51707
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||||||||| || | || ||||| || || ||||| || || | || ||
Sbjct 45489 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 45548
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || |||||| |||| | |||||||| ||||| || ||||||||||||
Sbjct 45549 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 45608
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| ||| || ||||| |||| || | ||| || | |||||||| |||| || |
Sbjct 45609 TCCTGGATCTTGGACTTGACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGAT 45667
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || |||| ||| || ||||| || |||||
Sbjct 45668 GGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703
Score = 86.0 bits (94), Expect = 6e-12
Identities = 132/186 (71%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || |||||||| || || | || || || || ||||| || |||
Sbjct 45735 GTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 45794
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | || ||||| ||||| || ||||||||||||||| ||| || ||||
Sbjct 45795 GCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 45854
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | ||| || | |||||||| |||| ||| | || || || || || ||
Sbjct 45855 ACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGT 45913
Query 127096 TTTTAC 127101
|| ||
Sbjct 45914 CTTAAC 45919
Score = 86.0 bits (94), Expect = 6e-12
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||| || || ||||| | |||||| ||| || ||||| || |||
Sbjct 46019 GTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 46078
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || ||||| || |||||||||||| ||| || ||||
Sbjct 46079 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 46138
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| |||| |||| || || | ||| || || | ||| | |||||||| ||
Sbjct 46139 ACGTTG-TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 46191
>seq87
Length=93243
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||||||||| || | || ||||| || || ||||| || || | || ||
Sbjct 6219 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 6160
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || |||||| |||| | |||||||| ||||| || ||||||||||||
Sbjct 6159 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 6100
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| ||| || ||||| |||| || | ||| || | |||||||| |||| || |
Sbjct 6099 TCCTGGATCTTGGACTTGACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGAT 6041
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || |||| ||| || ||||| || |||||
Sbjct 6040 GGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005
Score = 86.0 bits (94), Expect = 6e-12
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||| || || ||||| | |||||| ||| || ||||| || |||
Sbjct 5689 GTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 5630
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || ||||| || |||||||||||| ||| || ||||
Sbjct 5629 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 5570
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| |||| |||| || || | ||| || || | ||| | |||||||| ||
Sbjct 5569 ACGTTG-TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 5517
Score = 86.0 bits (94), Expect = 6e-12
Identities = 132/186 (71%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || |||||||| || || | || || || || ||||| || |||
Sbjct 5973 GTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 5914
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | || ||||| ||||| || ||||||||||||||| ||| || ||||
Sbjct 5913 GCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 5854
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | ||| || | |||||||| |||| ||| | || || || || || ||
Sbjct 5853 ACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGT 5795
Query 127096 TTTTAC 127101
|| ||
Sbjct 5794 CTTAAC 5789
>seq86
Length=94082
Score = 104 bits (114), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| ||||| ||| |||||
Sbjct 12374 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 12433
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| |||||||| || || || ||||||||||| ||| ||| || ||||| |||| ||
Sbjct 12434 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTG-TC 12492
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 12493 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 12552
Query 127105 A 127105
|
Sbjct 12553 A 12553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499272453680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |