Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq142 107 2e-18 seq87 107 2e-18 seq86 104 2e-17 >seq142 Length=51707 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||| || | || ||||| || || ||||| || || | || || Sbjct 45489 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 45548 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| ||||| || |||||||||||| Sbjct 45549 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 45608 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| || | ||| || | |||||||| |||| || | Sbjct 45609 TCCTGGATCTTGGACTTGACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGAT 45667 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || |||| ||| || ||||| || ||||| Sbjct 45668 GGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703 Score = 86.0 bits (94), Expect = 6e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || |||||||| || || | || || || || ||||| || ||| Sbjct 45735 GTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 45794 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || ||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 45795 GCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 45854 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| || | |||||||| |||| ||| | || || || || || || Sbjct 45855 ACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGT 45913 Query 127096 TTTTAC 127101 || || Sbjct 45914 CTTAAC 45919 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || || ||||| | |||||| ||| || ||||| || ||| Sbjct 46019 GTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 46078 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| || |||||||||||| ||| || |||| Sbjct 46079 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 46138 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| || || | ||| || || | ||| | |||||||| || Sbjct 46139 ACGTTG-TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 46191 >seq87 Length=93243 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||| || | || ||||| || || ||||| || || | || || Sbjct 6219 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 6160 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| |||| | |||||||| ||||| || |||||||||||| Sbjct 6159 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 6100 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| || | ||| || | |||||||| |||| || | Sbjct 6099 TCCTGGATCTTGGACTTGACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGTGTGAT 6041 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || |||| ||| || ||||| || ||||| Sbjct 6040 GGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || || ||||| | |||||| ||| || ||||| || ||| Sbjct 5689 GTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 5630 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| || |||||||||||| ||| || |||| Sbjct 5629 GCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 5570 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| || || | ||| || || | ||| | |||||||| || Sbjct 5569 ACGTTG-TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 5517 Score = 86.0 bits (94), Expect = 6e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || |||||||| || || | || || || || ||||| || ||| Sbjct 5973 GTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCA 5914 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || ||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 5913 GCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 5854 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| || | |||||||| |||| ||| | || || || || || || Sbjct 5853 ACGTTG-TCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGT 5795 Query 127096 TTTTAC 127101 || || Sbjct 5794 CTTAAC 5789 >seq86 Length=94082 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| ||||| ||| ||||| Sbjct 12374 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 12433 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| || || || ||||||||||| ||| ||| || ||||| |||| || Sbjct 12434 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTG-TC 12492 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 12493 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 12552 Query 127105 A 127105 | Sbjct 12553 A 12553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499272453680