Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq142 132 5e-26 seq87 132 5e-26 seq86 132 5e-26 seq23 98.7 1e-15 >seq142 Length=51707 Score = 132 bits (146), Expect = 5e-26 Identities = 177/242 (73%), Gaps = 8/242 (3%) Strand=Plus/Plus Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415 || |||| | ||| || | | |||||||||||| || | || |||||| ||||||| Sbjct 45466 TAAATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATAT 45525 Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 | ||||| || ||||| || |||| || |||||||| || ||||| || | ||||||| Sbjct 45526 TATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCT 45585 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC- 46533 |||||| || | || |||||||||| |||||| ||||| ||| | | | || || Sbjct 45586 GGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCT 45644 Query 46534 --GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGC 46591 |||| || || || | |||||||| || || |||| || || |||||||||||| Sbjct 45645 GAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGC 45701 Query 46592 AT 46593 || Sbjct 45702 AT 45703 Score = 104 bits (114), Expect = 3e-17 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| || || || || || ||||| | || || ||||||||||| ||||| Sbjct 46024 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 46083 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| ||| Sbjct 46084 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 46142 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| || || || || | |||||||||||||| || Sbjct 46143 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 46191 >seq87 Length=93243 Score = 132 bits (146), Expect = 5e-26 Identities = 177/242 (73%), Gaps = 8/242 (3%) Strand=Plus/Minus Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415 || |||| | ||| || | | |||||||||||| || | || |||||| ||||||| Sbjct 6242 TAAATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATAT 6183 Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 | ||||| || ||||| || |||| || |||||||| || ||||| || | ||||||| Sbjct 6182 TATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCT 6123 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC- 46533 |||||| || | || |||||||||| |||||| ||||| ||| | | | || || Sbjct 6122 GGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCT 6064 Query 46534 --GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGC 46591 |||| || || || | |||||||| || || |||| || || |||||||||||| Sbjct 6063 GAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGC 6007 Query 46592 AT 46593 || Sbjct 6006 AT 6005 Score = 104 bits (114), Expect = 3e-17 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| || || || || || ||||| | || || ||||||||||| ||||| Sbjct 5684 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 5625 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| ||| Sbjct 5624 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5566 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| || || || || | |||||||||||||| || Sbjct 5565 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 5517 >seq86 Length=94082 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| | Sbjct 12372 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 12431 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||| ||| |||||| |||||| ||| | Sbjct 12432 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 12490 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 12491 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12550 Query 46583 AA 46584 || Sbjct 12551 AA 12552 >seq23 Length=393977 Score = 98.7 bits (108), Expect = 1e-15 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || |||||||||||||||||||| Sbjct 298347 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 298406 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||| |||||||||||| | || | | ||||||||| || Sbjct 298407 GATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTAT 298448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236584171640