Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq142 132 5e-26
seq87 132 5e-26
seq86 132 5e-26
seq23 98.7 1e-15
>seq142
Length=51707
Score = 132 bits (146), Expect = 5e-26
Identities = 177/242 (73%), Gaps = 8/242 (3%)
Strand=Plus/Plus
Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415
|| |||| | ||| || | | |||||||||||| || | || |||||| |||||||
Sbjct 45466 TAAATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATAT 45525
Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475
| ||||| || ||||| || |||| || |||||||| || ||||| || | |||||||
Sbjct 45526 TATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCT 45585
Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC- 46533
|||||| || | || |||||||||| |||||| ||||| ||| | | | || ||
Sbjct 45586 GGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCT 45644
Query 46534 --GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGC 46591
|||| || || || | |||||||| || || |||| || || ||||||||||||
Sbjct 45645 GAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGC 45701
Query 46592 AT 46593
||
Sbjct 45702 AT 45703
Score = 104 bits (114), Expect = 3e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| || || || || || ||||| | || || ||||||||||| |||||
Sbjct 46024 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 46083
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | |||||||||| |||||| ||||| |||
Sbjct 46084 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 46142
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || ||||| || || || || | |||||||||||||| ||
Sbjct 46143 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 46191
>seq87
Length=93243
Score = 132 bits (146), Expect = 5e-26
Identities = 177/242 (73%), Gaps = 8/242 (3%)
Strand=Plus/Minus
Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415
|| |||| | ||| || | | |||||||||||| || | || |||||| |||||||
Sbjct 6242 TAAATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATAT 6183
Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475
| ||||| || ||||| || |||| || |||||||| || ||||| || | |||||||
Sbjct 6182 TATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCT 6123
Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC- 46533
|||||| || | || |||||||||| |||||| ||||| ||| | | | || ||
Sbjct 6122 GGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCT 6064
Query 46534 --GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGC 46591
|||| || || || | |||||||| || || |||| || || ||||||||||||
Sbjct 6063 GAGCTC---TCGACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGC 6007
Query 46592 AT 46593
||
Sbjct 6006 AT 6005
Score = 104 bits (114), Expect = 3e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| || || || || || ||||| | || || ||||||||||| |||||
Sbjct 5684 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 5625
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | |||||||||| |||||| ||||| |||
Sbjct 5624 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5566
Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || ||||| || || || || | |||||||||||||| ||
Sbjct 5565 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 5517
>seq86
Length=94082
Score = 132 bits (146), Expect = 5e-26
Identities = 140/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| |
Sbjct 12372 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 12431
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | || |||||| ||| |||||| |||||| ||| |
Sbjct 12432 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 12490
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || ||||| | || ||||| || |||||||| || || ||
Sbjct 12491 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12550
Query 46583 AA 46584
||
Sbjct 12551 AA 12552
>seq23
Length=393977
Score = 98.7 bits (108), Expect = 1e-15
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| | || ||||||||||||||||||||
Sbjct 298347 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 298406
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||| |||||||||||| | || | | ||||||||| ||
Sbjct 298407 GATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTAT 298448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565236584171640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |