Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq5 179 4e-40
seq1 179 4e-40
seq86 114 1e-20
seq142 95.1 1e-14
seq87 95.1 1e-14
>seq5
Length=559289
Score = 179 bits (198), Expect = 4e-40
Identities = 205/275 (75%), Gaps = 3/275 (1%)
Strand=Plus/Minus
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
|| ||||||||||| || || | || ||||| | ||||||||| ||| || |||
Sbjct 31615 TAAGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAG 31556
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
||||| ||||| || |||||| | ||| || ||| | |||||||||||| || ||
Sbjct 31555 CCGTAGAAGCAACGGGCCTCGGGAATCTGGACCTCTCCACTGAAACGCTCGACAAGGTTC 31496
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
|||||||| || |||||| ||||||||| |||||||| ||||| ||||| | |||
Sbjct 31495 TCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAAATGAAGTAACGC 31436
Query 133348 TCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
|| | |||||||| ||| | ||||||| | |||||||| || || | ||||||
Sbjct 31435 TCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCA 31376
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
||||||| || || |||||||| || ||||||||
Sbjct 31375 GCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACAT 31341
>seq1
Length=1003528
Score = 179 bits (198), Expect = 4e-40
Identities = 205/275 (75%), Gaps = 3/275 (1%)
Strand=Plus/Minus
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
|| ||||||||||| || || | || ||||| | ||||||||| ||| || |||
Sbjct 973373 TAAGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAG 973314
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
||||| ||||| || |||||| | ||| || ||| | |||||||||||| || ||
Sbjct 973313 CCGTAGAAGCAACGGGCCTCGGGAATCTGGACCTCTCCACTGAAACGCTCGACAAGGTTC 973254
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
|||||||| || |||||| ||||||||| |||||||| ||||| ||||| | |||
Sbjct 973253 TCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGGGAAATGAAGTAACGC 973194
Query 133348 TCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
|| | |||||||| ||| | ||||||| | |||||||| || || | ||||||
Sbjct 973193 TCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCA 973134
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
||||||| || || |||||||| || ||||||||
Sbjct 973133 GCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACAT 973099
>seq86
Length=94082
Score = 114 bits (126), Expect = 1e-20
Identities = 141/189 (75%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| |||| |||||| | | ||||| | |
Sbjct 12552 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 12493
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| |||| | |||| || |||| || || ||||| |||||| | ||||| ||||| |
Sbjct 12492 GACAACG--TCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCGCC 12435
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| || || ||||| || || | |||||||| | ||||||||||||||| |
Sbjct 12434 TGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 12375
Query 38431 AGGAAGCGA 38439
||| || ||
Sbjct 12374 AGGTAGGGA 12366
>seq142
Length=51707
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||||||||||||| | || || ||| ||| ||| | | | |||| | ||
Sbjct 46193 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACG-TCAAG 46135
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
|| |||| ||||| ||||| ||||| | ||||| ||||| || || | ||| |||
Sbjct 46134 TCCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGC 46075
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444
|| ||||| || || | |||||||| || || |||||||||||||| | || ||
Sbjct 46074 AAGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTC 46015
Query 38445 CATTTGGTGCTGCG 38458
|| |||| || ||
Sbjct 46014 CACCTGGTCCTTCG 46001
>seq87
Length=93243
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||||||||||||| | || || ||| ||| ||| | | | |||| | ||
Sbjct 5515 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACG-TCAAG 5573
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
|| |||| ||||| ||||| ||||| | ||||| ||||| || || | ||| |||
Sbjct 5574 TCCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGC 5633
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444
|| ||||| || || | |||||||| || || |||||||||||||| | || ||
Sbjct 5634 AAGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTC 5693
Query 38445 CATTTGGTGCTGCG 38458
|| |||| || ||
Sbjct 5694 CACCTGGTCCTTCG 5707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171193194880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |