Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq142 168 1e-36 seq87 168 1e-36 seq86 104 5e-17 seq23 95.1 3e-14 seq102 91.5 3e-13 seq3 91.5 3e-13 >seq142 Length=51707 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || ||||| ||||||||||| || || ||||| || || | ||||| | || || Sbjct 45491 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTC 45550 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || ||||||||||| ||||||||||| || || ||||| || |||||||| || ||||| Sbjct 45551 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 45610 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || || ||||||||| |||||||| || || || || || || || || | || Sbjct 45611 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGT 45670 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||||||||||| || || || | |||||| Sbjct 45671 CTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703 Score = 161 bits (178), Expect = 2e-34 Identities = 155/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || |||||||| || || | ||||| | || || || Sbjct 45723 ACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 45782 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||||||||| ||||| ||||| || |||||||| || ||||| || Sbjct 45783 AGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 45842 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||| || || || || || || ||||| | |||||| Sbjct 45843 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTT 45902 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || || | || || |||| Sbjct 45903 CCAGTTAGGGTCTTAACGA 45921 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| ||||| || || ||||| | ||| || | ||||| || Sbjct 46007 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 46066 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || || ||||| |||||||| || || ||||| || Sbjct 46067 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 46126 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||||||||| || || || || Sbjct 46127 ATCTTGGACTTGACGTTGTCGATAGTATC 46155 >seq87 Length=93243 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || ||||| ||||||||||| || || ||||| || || | ||||| | || || Sbjct 6217 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTC 6158 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || ||||||||||| ||||||||||| || || ||||| || |||||||| || ||||| Sbjct 6157 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 6098 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || || ||||||||| |||||||| || || || || || || || || | || Sbjct 6097 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGT 6038 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||||||||||| || || || | |||||| Sbjct 6037 CTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005 Score = 161 bits (178), Expect = 2e-34 Identities = 155/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || |||||||| || || | ||||| | || || || Sbjct 5985 ACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 5926 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||||||||| ||||| ||||| || |||||||| || ||||| || Sbjct 5925 AGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 5866 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||| || || || || || || ||||| | |||||| Sbjct 5865 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTT 5806 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || || | || || |||| Sbjct 5805 CCAGTTAGGGTCTTAACGA 5787 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| ||||| || || ||||| | ||| || | ||||| || Sbjct 5701 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 5642 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || || ||||| |||||||| || || ||||| || Sbjct 5641 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 5582 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||||||||| || || || || Sbjct 5581 ATCTTGGACTTGACGTTGTCGATAGTATC 5553 >seq86 Length=94082 Score = 104 bits (114), Expect = 5e-17 Identities = 133/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| ||||||||||| || |||||||| Sbjct 12374 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 12433 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || |||||||| || || || || || || ||||||||| || Sbjct 12434 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 12493 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 12494 ATGGTGTCGCTCGA---CTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12550 Query 195130 AA 195131 || Sbjct 12551 AA 12552 >seq23 Length=393977 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || |||||||| | ||||| | ||||| ||| Sbjct 298330 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCG 298389 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || || ||||| || || || || || |||||| Sbjct 298390 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 298446 >seq102 Length=78597 Score = 91.5 bits (100), Expect = 3e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| | |||||| ||||||| ||||||||| | || | | ||| || || ||| Sbjct 3798 TTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGG 3739 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || ||||||||||| || || || || || | |||||| || ||| |||||||| Sbjct 3738 ACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGAC 3679 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 |||| || | | ||||| | ||||| | | | ||| | ||||| || | Sbjct 3678 GCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACTATCAAGGCTCAGAAG 3619 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 || ||| | ||| || | || || ||| |||| ||||| || |||||| Sbjct 3618 CTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTCTACAAG 3559 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 ||||| | |||||||||||||||||| Sbjct 3558 GATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 3526 >seq3 Length=875381 Score = 91.5 bits (100), Expect = 3e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| | |||||| ||||||| ||||||||| | || | | ||| || || ||| Sbjct 871599 TTCTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGG 871658 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || ||||||||||| || || || || || | |||||| || ||| |||||||| Sbjct 871659 ACACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGAC 871718 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 |||| || | | ||||| | ||||| | | | ||| | ||||| || | Sbjct 871719 GCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACTATCAAGGCTCAGAAG 871778 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 || ||| | ||| || | || || ||| |||| ||||| || |||||| Sbjct 871779 CTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTCTACAAG 871838 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 ||||| | |||||||||||||||||| Sbjct 871839 GATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 871871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477946685119