Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq142 98.7 6e-16 seq87 98.7 6e-16 >seq142 Length=51707 Score = 98.7 bits (108), Expect = 6e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| ||| | ||| || ||||| || ||||||||||| || | ||| | || Sbjct 45491 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTC 45550 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 45551 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 45610 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | || | || | ||| || |||| || ||||| Sbjct 45611 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGT 45670 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | |||||| |||||||| |||||| Sbjct 45671 CTTTCCTGTCAAAGTCTTGACAAAGATTTGCATA 45704 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| |||| || |||||||| ||||||||||| || | ||| | || |||||||| Sbjct 45728 GTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTG 45787 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || ||||||||||| | || | ||||||||||| ||||| Sbjct 45788 CTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 45847 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | || | || | ||| || |||| ||| || || ||||| || Sbjct 45848 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGT 45907 Query 34958 GAGAGTCTTCAC 34969 || ||||| || Sbjct 45908 TAGGGTCTTAAC 45919 Score = 86.0 bits (94), Expect = 4e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || || || |||||||| ||||||||| | || |||| || Sbjct 46007 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 46066 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 46067 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 46126 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | || |||||| || | ||| |||||||| Sbjct 46127 ATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTG 46186 Query 34953 CCCGTGA 34959 || |||| Sbjct 46187 CCAGTGA 46193 >seq87 Length=93243 Score = 98.7 bits (108), Expect = 6e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| ||| | ||| || ||||| || ||||||||||| || | ||| | || Sbjct 6217 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTC 6158 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 6157 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 6098 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | || | || | ||| || |||| || ||||| Sbjct 6097 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGT 6038 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | |||||| |||||||| |||||| Sbjct 6037 CTTTCCTGTCAAAGTCTTGACAAAGATTTGCATA 6004 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| |||| || |||||||| ||||||||||| || | ||| | || |||||||| Sbjct 5980 GTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCCAGCTG 5921 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || ||||||||||| | || | ||||||||||| ||||| Sbjct 5920 CTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 5861 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | || | || | ||| || |||| ||| || || ||||| || Sbjct 5860 GGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTCTTTCCAGT 5801 Query 34958 GAGAGTCTTCAC 34969 || ||||| || Sbjct 5800 TAGGGTCTTAAC 5789 Score = 86.0 bits (94), Expect = 4e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || || || |||||||| ||||||||| | || |||| || Sbjct 5701 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 5642 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 5641 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 5582 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | || |||||| || | ||| |||||||| Sbjct 5581 ATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTG 5522 Query 34953 CCCGTGA 34959 || |||| Sbjct 5521 CCAGTGA 5515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632583186696