Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 82.4 9e-11
seq1 82.4 9e-11
>seq5
Length=559289
Score = 82.4 bits (90), Expect = 9e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| || ||| || || ||| || || |||||||| | | |||| || || ||
Sbjct 31952 AACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 31893
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| || | ||||||||||| || | || || | |||||| || || || ||||| |||
Sbjct 31892 AAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCA 31833
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAG 19109
|| ||||| ||||| || || || || || ||||| ||
Sbjct 31832 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACCAG 31795
>seq1
Length=1003528
Score = 82.4 bits (90), Expect = 9e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| || ||| || || ||| || || |||||||| | | |||| || || ||
Sbjct 973710 AACAGCAGACAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 973651
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| || | ||||||||||| || | || || | |||||| || || || ||||| |||
Sbjct 973650 AAAGTCAGGCCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCA 973591
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAG 19109
|| ||||| ||||| || || || || || ||||| ||
Sbjct 973590 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACCAG 973553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562106994225480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |