Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq142 102 5e-16
seq87 102 5e-16
>seq142
Length=51707
Score = 102 bits (112), Expect = 5e-16
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| ||||| |||||||| || || || |||||| || | |||||
Sbjct 45710 ACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGT 45769
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| || || || ||||| ||||| || ||||||||||| || || || ||||| ||
Sbjct 45770 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCC 45829
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729
|||||||| || ||||| ||||| ||||| ||||| | | | | | || |
Sbjct 45830 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGA-CCTCGA 45888
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762
|||| ||||| || || || || ||||||||||
Sbjct 45889 GGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 45921
Score = 86.0 bits (94), Expect = 4e-11
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|||||||| | || || | ||| ||||| ||||| ||||| || |||||||| ||
Sbjct 46037 TTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGC 46096
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| ||||||||||| || |||||||| || ||||| ||||| || ||||||||
Sbjct 46097 TGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCG 46156
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750
|| | |||||||| || ||||| || ||||
Sbjct 46157 CTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGA 46193
>seq87
Length=93243
Score = 102 bits (112), Expect = 5e-16
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| ||||| |||||||| || || || |||||| || | |||||
Sbjct 5998 ACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGT 5939
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| || || || ||||| ||||| || ||||||||||| || || || ||||| ||
Sbjct 5938 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCC 5879
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729
|||||||| || ||||| ||||| ||||| ||||| | | | | | || |
Sbjct 5878 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGA-CCTCGA 5820
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762
|||| ||||| || || || || ||||||||||
Sbjct 5819 GGGTGATAGTCTTTCCAGTTAGGGTCTTAACGA 5787
Score = 86.0 bits (94), Expect = 4e-11
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|||||||| | || || | ||| ||||| ||||| ||||| || |||||||| ||
Sbjct 5671 TTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGC 5612
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| ||||||||||| || |||||||| || ||||| ||||| || ||||||||
Sbjct 5611 TGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATCG 5552
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750
|| | |||||||| || ||||| || ||||
Sbjct 5551 CTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGA 5515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268168176023036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |