Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq102 158 4e-33 seq3 158 4e-33 seq43 102 2e-16 seq174 84.2 6e-11 seq8 84.2 6e-11 seq7 84.2 6e-11 >seq102 Length=78597 Score = 158 bits (174), Expect = 4e-33 Identities = 364/546 (67%), Gaps = 7/546 (1%) Strand=Plus/Plus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || ||||||||| ||||||||| || || || || || | ||||||||| Sbjct 3476 CTGTACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 3535 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 ||| || |||| |||||||||||||| || ||| | ||| | || ||||| |||| Sbjct 3536 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGA 3595 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || ||||| |||||| | | || || || |||| | | ||| ||| Sbjct 3596 GCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCC 3655 Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865 ||| || || | || | ||||| | | || |||||||| |||| ||| || | Sbjct 3656 TGCTCGTACTTCGCGTAGAGAGCGT--CGAACTCATCACCGTAGACATCAGCCAGGCCGG 3713 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925 || || | ||| || || || | ||| || | || |||| ||| || | Sbjct 3714 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 3773 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 ||| | ||| | ||| ||||| ||||| | || |||||| | ||||| | Sbjct 3774 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 3833 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 ||||||| || || | ||| || | ||| | || |||||||| || || |||| Sbjct 3834 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 3893 Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 || ||| | |||| |||||||| || ||||| || || || || || || |||| Sbjct 3894 AAGCGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 3953 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 |||||||||| |||||| ||||| | ||| |||||||| | ||| | |||||| | | Sbjct 3954 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 4013 Query 156163 AGCGAA 156168 ||||| Sbjct 4014 CGCGAA 4019 >seq3 Length=875381 Score = 158 bits (174), Expect = 4e-33 Identities = 364/546 (67%), Gaps = 7/546 (1%) Strand=Plus/Minus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || ||||||||| ||||||||| || || || || || | ||||||||| Sbjct 871921 CTGTACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 871862 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 ||| || |||| |||||||||||||| || ||| | ||| | || ||||| |||| Sbjct 871861 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGA 871802 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || ||||| |||||| | | || || || |||| | | ||| ||| Sbjct 871801 GCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCC 871742 Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865 ||| || || | || | ||||| | | || |||||||| |||| ||| || | Sbjct 871741 TGCTCGTACTTCGCGTAGAGAGCGT--CGAACTCATCACCGTAGACATCAGCCAGGCCGG 871684 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925 || || | ||| || || || | ||| || | || |||| ||| || | Sbjct 871683 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 871624 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 ||| | ||| | ||| ||||| ||||| | || |||||| | ||||| | Sbjct 871623 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 871564 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 ||||||| || || | ||| || | ||| | || |||||||| || || |||| Sbjct 871563 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 871504 Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 || ||| | |||| |||||||| || ||||| || || || || || || |||| Sbjct 871503 AAGCGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 871444 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 |||||||||| |||||| ||||| | ||| |||||||| | ||| | |||||| | | Sbjct 871443 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 871384 Query 156163 AGCGAA 156168 ||||| Sbjct 871383 CGCGAA 871378 >seq43 Length=296170 Score = 102 bits (112), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| ||||||||| | || ||||| |||||| | ||||||||| Sbjct 222762 AGAATTTCCTTGAGACGTGGAACACCAAGCGTGACGTT---CTTGGATGACACACCAGCA 222818 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||| || ||||| || | |||||| | |||||||||||| || ||||||| Sbjct 222819 AAGTGGAAGGTGTTCAGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGA 222878 Query 301933 ATACCAACCATTTCTCCTGG 301952 | || |||||||| || || Sbjct 222879 ACGCCGACCATTTCACCAGG 222898 >seq174 Length=17491 Score = 84.2 bits (92), Expect = 6e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 353938 TCGGGGCAGAGTGCAGAATAGAATTCC-CGCTGATGAGATATAATAATCACACC-CCCAA 353995 || |||||||| ||| ||| ||| || || ||||| || |||| ||||| ||| Sbjct 14457 TCAGGGCAGAGAGCACCCACGAACTCCTCGTTG-TGAGAAATCATAACAACACCACCCTT 14399 Query 353996 GATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAG 354055 || | | ||| || ||| ||| |||| ||||||||||| || | ||| ||||| | Sbjct 14398 GAAGTCACG-AATGGCAACGGCCAGACCACCGAGCGAGTCACGATCCAAGAAGTTAGTCG 14340 Query 354056 GTTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAA 354115 | ||||| |||| || | ||| || | ||||||| || |||| || || ||||| | Sbjct 14339 GCTCGTCCAGGACCAGCAAGTGGGGGTTGTTCCACATAGCACCAGCAAGCACGACCTTGA 14280 Query 354116 CCTTCTGTCCGCCTGATAG 354134 ||||||| || || || || Sbjct 14279 CCTTCTGACCACCGGAAAG 14261 >seq8 Length=351713 Score = 84.2 bits (92), Expect = 6e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 353938 TCGGGGCAGAGTGCAGAATAGAATTCC-CGCTGATGAGATATAATAATCACACC-CCCAA 353995 || |||||||| ||| ||| ||| || || ||||| || |||| ||||| ||| Sbjct 341294 TCAGGGCAGAGAGCACCCACGAACTCCTCGTTG-TGAGAAATCATAACAACACCACCCTT 341352 Query 353996 GATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAG 354055 || | | ||| || ||| ||| |||| ||||||||||| || | ||| ||||| | Sbjct 341353 GAAGTCACG-AATGGCAACGGCCAGACCACCGAGCGAGTCACGATCCAAGAAGTTAGTCG 341411 Query 354056 GTTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAA 354115 | ||||| |||| || | ||| || | ||||||| || |||| || || ||||| | Sbjct 341412 GCTCGTCCAGGACCAGCAAGTGGGGGTTGTTCCACATAGCACCAGCAAGCACGACCTTGA 341471 Query 354116 CCTTCTGTCCGCCTGATAG 354134 ||||||| || || || || Sbjct 341472 CCTTCTGACCACCGGAAAG 341490 >seq7 Length=383750 Score = 84.2 bits (92), Expect = 6e-11 Identities = 125/177 (71%), Gaps = 8/177 (5%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| | |||||||||||||| ||||| || |||||||| |||||||| || || Sbjct 145180 GCGCCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCGTCACGG 145239 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600 || | |||||| | |||||||| || ||| | ||||||| | ||||| Sbjct 145240 GCACGACCCTCCACGGGCTGACGGGTCAGAATCTGAGTAGGACCACGAGCACGAGCG--- 145296 Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 || ||| || | ||||| || |||||||||||| | | |||||| | ||| Sbjct 145297 -TGGATCTTGTCGTCCACCATGTGGCGCAGACGCTGGTAGTAGGTGGGACCCAAGAA 145352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471812753580609