Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq102 158 4e-33
seq3 158 4e-33
seq43 102 2e-16
seq174 84.2 6e-11
seq8 84.2 6e-11
seq7 84.2 6e-11
>seq102
Length=78597
Score = 158 bits (174), Expect = 4e-33
Identities = 364/546 (67%), Gaps = 7/546 (1%)
Strand=Plus/Plus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
||||| || ||||||||| ||||||||| || || || || || | |||||||||
Sbjct 3476 CTGTACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 3535
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
||| || |||| |||||||||||||| || ||| | ||| | || ||||| ||||
Sbjct 3536 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGA 3595
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807
|| || ||||| |||||| | | || || || |||| | | ||| |||
Sbjct 3596 GCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCC 3655
Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
||| || || | || | ||||| | | || |||||||| |||| ||| || |
Sbjct 3656 TGCTCGTACTTCGCGTAGAGAGCGT--CGAACTCATCACCGTAGACATCAGCCAGGCCGG 3713
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925
|| || | ||| || || || | ||| || | || |||| ||| || |
Sbjct 3714 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 3773
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985
||| | ||| | ||| ||||| ||||| | || |||||| | ||||| |
Sbjct 3774 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 3833
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
||||||| || || | ||| || | ||| | || |||||||| || || ||||
Sbjct 3834 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 3893
Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
|| ||| | |||| |||||||| || ||||| || || || || || || ||||
Sbjct 3894 AAGCGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 3953
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
|||||||||| |||||| ||||| | ||| |||||||| | ||| | |||||| | |
Sbjct 3954 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 4013
Query 156163 AGCGAA 156168
|||||
Sbjct 4014 CGCGAA 4019
>seq3
Length=875381
Score = 158 bits (174), Expect = 4e-33
Identities = 364/546 (67%), Gaps = 7/546 (1%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
||||| || ||||||||| ||||||||| || || || || || | |||||||||
Sbjct 871921 CTGTACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 871862
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
||| || |||| |||||||||||||| || ||| | ||| | || ||||| ||||
Sbjct 871861 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGA 871802
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807
|| || ||||| |||||| | | || || || |||| | | ||| |||
Sbjct 871801 GCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCC 871742
Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
||| || || | || | ||||| | | || |||||||| |||| ||| || |
Sbjct 871741 TGCTCGTACTTCGCGTAGAGAGCGT--CGAACTCATCACCGTAGACATCAGCCAGGCCGG 871684
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925
|| || | ||| || || || | ||| || | || |||| ||| || |
Sbjct 871683 GGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGA 871624
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985
||| | ||| | ||| ||||| ||||| | || |||||| | ||||| |
Sbjct 871623 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGT 871564
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
||||||| || || | ||| || | ||| | || |||||||| || || ||||
Sbjct 871563 TCTTCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 871504
Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
|| ||| | |||| |||||||| || ||||| || || || || || || ||||
Sbjct 871503 AAGCGCCAGGGCGCTTGTTACCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 871444
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
|||||||||| |||||| ||||| | ||| |||||||| | ||| | |||||| | |
Sbjct 871443 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 871384
Query 156163 AGCGAA 156168
|||||
Sbjct 871383 CGCGAA 871378
>seq43
Length=296170
Score = 102 bits (112), Expect = 2e-16
Identities = 107/140 (76%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| ||||||||| | || ||||| |||||| | |||||||||
Sbjct 222762 AGAATTTCCTTGAGACGTGGAACACCAAGCGTGACGTT---CTTGGATGACACACCAGCA 222818
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|||||||| || ||||| || | |||||| | |||||||||||| || |||||||
Sbjct 222819 AAGTGGAAGGTGTTCAGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGA 222878
Query 301933 ATACCAACCATTTCTCCTGG 301952
| || |||||||| || ||
Sbjct 222879 ACGCCGACCATTTCACCAGG 222898
>seq174
Length=17491
Score = 84.2 bits (92), Expect = 6e-11
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 353938 TCGGGGCAGAGTGCAGAATAGAATTCC-CGCTGATGAGATATAATAATCACACC-CCCAA 353995
|| |||||||| ||| ||| ||| || || ||||| || |||| ||||| |||
Sbjct 14457 TCAGGGCAGAGAGCACCCACGAACTCCTCGTTG-TGAGAAATCATAACAACACCACCCTT 14399
Query 353996 GATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAG 354055
|| | | ||| || ||| ||| |||| ||||||||||| || | ||| ||||| |
Sbjct 14398 GAAGTCACG-AATGGCAACGGCCAGACCACCGAGCGAGTCACGATCCAAGAAGTTAGTCG 14340
Query 354056 GTTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAA 354115
| ||||| |||| || | ||| || | ||||||| || |||| || || ||||| |
Sbjct 14339 GCTCGTCCAGGACCAGCAAGTGGGGGTTGTTCCACATAGCACCAGCAAGCACGACCTTGA 14280
Query 354116 CCTTCTGTCCGCCTGATAG 354134
||||||| || || || ||
Sbjct 14279 CCTTCTGACCACCGGAAAG 14261
>seq8
Length=351713
Score = 84.2 bits (92), Expect = 6e-11
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 353938 TCGGGGCAGAGTGCAGAATAGAATTCC-CGCTGATGAGATATAATAATCACACC-CCCAA 353995
|| |||||||| ||| ||| ||| || || ||||| || |||| ||||| |||
Sbjct 341294 TCAGGGCAGAGAGCACCCACGAACTCCTCGTTG-TGAGAAATCATAACAACACCACCCTT 341352
Query 353996 GATAGCTCTTAATTGCTGTGGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAG 354055
|| | | ||| || ||| ||| |||| ||||||||||| || | ||| ||||| |
Sbjct 341353 GAAGTCACG-AATGGCAACGGCCAGACCACCGAGCGAGTCACGATCCAAGAAGTTAGTCG 341411
Query 354056 GTTCGTCAAGGATAAGAACGTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAA 354115
| ||||| |||| || | ||| || | ||||||| || |||| || || ||||| |
Sbjct 341412 GCTCGTCCAGGACCAGCAAGTGGGGGTTGTTCCACATAGCACCAGCAAGCACGACCTTGA 341471
Query 354116 CCTTCTGTCCGCCTGATAG 354134
||||||| || || || ||
Sbjct 341472 CCTTCTGACCACCGGAAAG 341490
>seq7
Length=383750
Score = 84.2 bits (92), Expect = 6e-11
Identities = 125/177 (71%), Gaps = 8/177 (5%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| ||||| | |||||||||||||| ||||| || |||||||| |||||||| || ||
Sbjct 145180 GCGCCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCGTCACGG 145239
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600
|| | |||||| | |||||||| || ||| | ||||||| | |||||
Sbjct 145240 GCACGACCCTCCACGGGCTGACGGGTCAGAATCTGAGTAGGACCACGAGCACGAGCG--- 145296
Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
|| ||| || | ||||| || |||||||||||| | | |||||| | |||
Sbjct 145297 -TGGATCTTGTCGTCCACCATGTGGCGCAGACGCTGGTAGTAGGTGGGACCCAAGAA 145352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471812753580609
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |