Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq102 95.1 3e-14 seq3 95.1 3e-14 seq142 89.7 1e-12 seq87 89.7 1e-12 >seq102 Length=78597 Score = 95.1 bits (104), Expect = 3e-14 Identities = 168/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || |||||||||| |||||||| ||||| ||| | |||||| | | |||| || | Sbjct 3554 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTAC 3613 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || || || | || | | | | || || | ||||| || | ||| Sbjct 3614 CAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAG 3673 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | ||||| || | ||||| | || | || ||||| || || || ||||| ||| Sbjct 3674 AGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAG 3733 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||| | || | || ||| || | |||||||||||| |||| |||||| | ||| Sbjct 3734 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCG 3793 Query 173347 TAGAA 173351 ||||| Sbjct 3794 TAGAA 3798 >seq3 Length=875381 Score = 95.1 bits (104), Expect = 3e-14 Identities = 168/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || |||||||||| |||||||| ||||| ||| | |||||| | | |||| || | Sbjct 871843 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTAC 871784 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || || || | || | | | | || || | ||||| || | ||| Sbjct 871783 CAGAGCTTCTGAGCCTTGATAGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAG 871724 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | ||||| || | ||||| | || | || ||||| || || || ||||| ||| Sbjct 871723 AGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGGCCTCGTTGGGACAGAAG 871664 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||| | || | || ||| || | |||||||||||| |||| |||||| | ||| Sbjct 871663 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAGTCCACAAAGCG 871604 Query 173347 TAGAA 173351 ||||| Sbjct 871603 TAGAA 871599 >seq142 Length=51707 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| || ||||| ||||| ||||| ||||||| ||||||||| | | ||| Sbjct 45483 CGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTA 45542 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||| || ||||||||||| || ||||||||||| || || || Sbjct 45543 CGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTG 45586 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||| ||||| | ||||||||| | | ||| | ||| || ||| Sbjct 45723 ACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 45782 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| ||||| || Sbjct 45783 AGCTGCTTACCAGCGAAGATAAGACGTTGCTG 45814 >seq87 Length=93243 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||| ||||| | ||||||||| | | ||| | ||| || ||| Sbjct 5985 ACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 5926 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || ||||||||||| ||||| || Sbjct 5925 AGCTGCTTACCAGCGAAGATAAGACGTTGCTG 5894 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||| || ||||| ||||| ||||| ||||||| ||||||||| | | ||| Sbjct 6225 CGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTA 6166 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||| || ||||||||||| || ||||||||||| || || || Sbjct 6165 CGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTG 6122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181816908485697