Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5 158 2e-32 seq1 158 2e-32 seq102 122 1e-21 seq3 122 1e-21 >seq5 Length=559289 Score = 158 bits (174), Expect = 2e-32 Identities = 220/303 (73%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||||||||| |||||||| |||||| | || | Sbjct 31331 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATC 31389 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 31390 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 31445 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || |||||||| ||||| || ||||||| ||| || || || ||||||||| | Sbjct 31446 ATTTCCCACGTCCTGGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGT 31504 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 31505 CGAGCGTTTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 31564 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| || || |||||||| || | ||||| Sbjct 31565 CATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTATATTAAGGA 31624 Query 1456068 CCC 1456070 || Sbjct 31625 GCC 31627 Score = 114 bits (126), Expect = 2e-19 Identities = 184/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| || |||||||||| || ||| | ||||| | | || | || || | Sbjct 31996 ATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTTCCTTACTGACGCTCTTCCCTGCGGT 32055 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| ||| |||||||||| ||||||| || || ||||| ||||||| Sbjct 32056 CTGCTTGGCATGAACTCCAA-GCTCATGTGCGAGTACATCGAGTTC-GTCGCTGACCGCC 32113 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| |||||| | ||||| ||||| | ||||||| ||| | ||| Sbjct 32114 TGCTGGTGGCTCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCATG 32172 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 32173 GAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 32232 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 32233 AAGGCTGGTGTCATGGCCA 32251 >seq1 Length=1003528 Score = 158 bits (174), Expect = 2e-32 Identities = 220/303 (73%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||||||||| |||||||| |||||| | || | Sbjct 973089 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATC 973147 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 973148 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 973203 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || |||||||| ||||| || ||||||| ||| || || || ||||||||| | Sbjct 973204 ATTTCCCACGTCCTGGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGT 973262 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 973263 CGAGCGTTTCAGTGGAGAGGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 973322 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| || || |||||||| || | ||||| Sbjct 973323 CATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACTTATATTAAGGA 973382 Query 1456068 CCC 1456070 || Sbjct 973383 GCC 973385 Score = 114 bits (126), Expect = 2e-19 Identities = 184/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| || |||||||||| || ||| | ||||| | | || | || || | Sbjct 973754 ATCATTGTTGAGGCCGTCGGCATTGAGCAGGAGTTCCTTACTGACGCTCTTCCCTGCGGT 973813 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| ||| |||||||||| ||||||| || || ||||| ||||||| Sbjct 973814 CTGCTTGGCATGAACTCCAA-GCTCATGTGCGAGTACATCGAGTTC-GTCGCTGACCGCC 973871 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| |||||| | ||||| ||||| | ||||||| ||| | ||| Sbjct 973872 TGCTGGTGGCTCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCATG 973930 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 973931 GAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 973990 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 973991 AAGGCTGGTGTCATGGCCA 974009 >seq102 Length=78597 Score = 122 bits (134), Expect = 1e-21 Identities = 202/289 (70%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| ||| ||||| ||| || | ||||| | || ||||||| || || | Sbjct 4206 ATGTCCCAGAAGTACTTCAC-TCACGCCTCCCCCACTTTGTTCAATGCCGCTACTCCCCA 4148 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 || ||| | | || ||||| ||| | ||| ||| || || || ||||| ||||| Sbjct 4147 GCCCCAGCTTGCATCTTGCTTCCTGGTTGACGTGAGCGCAGACAGCATTGAGGGTATCTA 4088 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 |||||| |||||| || || | ||||||||| | || ||||| |||||| | || Sbjct 4087 TGACACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGCGGTATCGGTCTGAACGT 4028 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | ||||| | || | ||| | | || ||||||||| |||||||| | Sbjct 4027 CCACCGCATTCGCGCTACCGGTTCGTACATTGGTGGAACCAACGGCTCCTCCAACGGTAT 3968 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||| || ||||| || || |||||| |||| || ||||| || |||||| Sbjct 3967 TGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATGTTGACCAG 3919 Score = 109 bits (120), Expect = 8e-18 Identities = 295/454 (65%), Gaps = 40/454 (9%) Strand=Plus/Minus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| ||||| |||||| ||||||||| |||||||||||||| || || | | Sbjct 3910 CAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 3851 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||||||||| || ||||| || | || || || ||||| Sbjct 3850 CCTTGATCTGCGGAAGAACCACGGTAA-GGAGGAGG-----TTCGTGCCCGTGACCTCTT 3797 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| ||||||| ||| || || ||| ||| | | | || | | |||||| | Sbjct 3796 CTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 3737 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| || || |||||| ||||||||| || ||| || | | || ||||| Sbjct 3736 ACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGACGC 3677 Query 262036 CCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGAC--- 262091 ||||| | | || ||| | |||| ||||| ||| Sbjct 3676 TCTCTACGCGAAGTACGA---------------GCAGGAGGGCCGTGGCCGCAAGACTAT 3632 Query 262092 -----------AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTA 262140 || |||||| |||||| ||| ||| || | ||||| || | |||| Sbjct 3631 CAAGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTT 3572 Query 262141 CATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CG 262198 |||| |||||||||| || |||| || || |||||| |||||||||| || | || Sbjct 3571 CATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCG 3512 Query 262199 ACAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232 ||| ||||||||||||| ||||| ||| ||| Sbjct 3511 -CAG-CTCCAACCTGTGCACTGAGATTGTCGAGT 3480 >seq3 Length=875381 Score = 122 bits (134), Expect = 1e-21 Identities = 202/289 (70%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| ||| ||||| ||| || | ||||| | || ||||||| || || | Sbjct 871191 ATGTCCCAGAAGTACTTCAC-TCACGCCTCCCCCACTTTGTTCAATGCCGCTACTCCCCA 871249 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 || ||| | | || ||||| ||| | ||| ||| || || || ||||| ||||| Sbjct 871250 GCCCCAGCTTGCATCTTGCTTCCTGGTTGACGTGAGCGCAGACAGCATTGAGGGTATCTA 871309 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 |||||| |||||| || || | ||||||||| | || ||||| |||||| | || Sbjct 871310 TGACACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGCGGTATCGGTCTGAACGT 871369 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | ||||| | || | ||| | | || ||||||||| |||||||| | Sbjct 871370 CCACCGCATTCGCGCTACCGGTTCGTACATTGGTGGAACCAACGGCTCCTCCAACGGTAT 871429 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||| || ||||| || || |||||| |||| || ||||| || |||||| Sbjct 871430 TGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATGTTGACCAG 871478 Score = 109 bits (120), Expect = 8e-18 Identities = 295/454 (65%), Gaps = 40/454 (9%) Strand=Plus/Plus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| ||||| |||||| ||||||||| |||||||||||||| || || | | Sbjct 871487 CAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 871546 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||||||||| || ||||| || | || || || ||||| Sbjct 871547 CCTTGATCTGCGGAAGAACCACGGTAA-GGAGGAGG-----TTCGTGCCCGTGACCTCTT 871600 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| ||||||| ||| || || ||| ||| | | | || | | |||||| | Sbjct 871601 CTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 871660 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| || || |||||| ||||||||| || ||| || | | || ||||| Sbjct 871661 ACTCTTCTGTCCCAACGAGGCCCCCGGCCTGGCTGATGTCTACGGTGATGAGTTCGACGC 871720 Query 262036 CCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGAC--- 262091 ||||| | | || ||| | |||| ||||| ||| Sbjct 871721 TCTCTACGCGAAGTACGA---------------GCAGGAGGGCCGTGGCCGCAAGACTAT 871765 Query 262092 -----------AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTA 262140 || |||||| |||||| ||| ||| || | ||||| || | |||| Sbjct 871766 CAAGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTT 871825 Query 262141 CATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CG 262198 |||| |||||||||| || |||| || || |||||| |||||||||| || | || Sbjct 871826 CATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCG 871885 Query 262199 ACAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232 ||| ||||||||||||| ||||| ||| ||| Sbjct 871886 -CAG-CTCCAACCTGTGCACTGAGATTGTCGAGT 871917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177786411877634