Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq86 96.9 3e-15 seq142 95.1 1e-14 seq87 95.1 1e-14 >seq86 Length=94082 Score = 96.9 bits (106), Expect = 3e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || |||||||| || || || | Sbjct 12372 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 12431 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||| | |||| || |||||| ||| |||||| ||| | |||| Sbjct 12432 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 12490 Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||||||||| || || || | || || || |||||||||| || || || Sbjct 12491 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12550 Query 35726 AA 35727 || Sbjct 12551 AA 12552 >seq142 Length=51707 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | |||||||| || | || |||||| || || || || || | Sbjct 45477 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 45536 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| |||||||||||||| || || || | ||||||||||| | ||| Sbjct 45537 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 45596 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | || |||||||||| |||||| ||| | |||| | | || || |||| || Sbjct 45597 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCTC---TC 45652 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || || |||||||| || ||||| || ||||| Sbjct 45653 GACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703 Score = 91.5 bits (100), Expect = 1e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||| ||||| | | ||| || | || || |||||||| || || || Sbjct 46024 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 46083 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| | |||||||||| |||||| ||| | || Sbjct 46084 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 46142 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | || ||||| || || ||||| | ||||| ||||| || || Sbjct 46143 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 46191 >seq87 Length=93243 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | |||||||| || | || |||||| || || || || || | Sbjct 6231 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 6172 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| |||||||||||||| || || || | ||||||||||| | ||| Sbjct 6171 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 6112 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | || |||||||||| |||||| ||| | |||| | | || || |||| || Sbjct 6111 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCTC---TC 6056 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || || |||||||| || ||||| || ||||| Sbjct 6055 GACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005 Score = 91.5 bits (100), Expect = 1e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||| ||||| | | ||| || | || || |||||||| || || || Sbjct 5684 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 5625 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| | |||||||||| |||||| ||| | || Sbjct 5624 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5566 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | || ||||| || || ||||| | ||||| ||||| || || Sbjct 5565 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 5517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792151825560