Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq86 96.9 3e-15
seq142 95.1 1e-14
seq87 95.1 1e-14
>seq86
Length=94082
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || ||| || | || || |||||||| || || || |
Sbjct 12372 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 12431
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||||||||| | |||| || |||||| ||| |||||| ||| | ||||
Sbjct 12432 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 12490
Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||||||||| || || || | || || || |||||||||| || || ||
Sbjct 12491 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12550
Query 35726 AA 35727
||
Sbjct 12551 AA 12552
>seq142
Length=51707
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | |||||||| || | || |||||| || || || || || |
Sbjct 45477 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 45536
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||||||||||||| || || || | ||||||||||| | |||
Sbjct 45537 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 45596
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| || |||||||||| |||||| ||| | |||| | | || || |||| ||
Sbjct 45597 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCTC---TC 45652
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | ||||| || || || |||||||| || ||||| || |||||
Sbjct 45653 GACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703
Score = 91.5 bits (100), Expect = 1e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| ||||| ||||| | | ||| || | || || |||||||| || || ||
Sbjct 46024 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 46083
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | ||||| | |||||||||| |||||| ||| | ||
Sbjct 46084 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 46142
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | || ||||| || || ||||| | ||||| ||||| || ||
Sbjct 46143 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 46191
>seq87
Length=93243
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | |||||||| || | || |||||| || || || || || |
Sbjct 6231 CCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAG 6172
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| |||||||||||||| || || || | ||||||||||| | |||
Sbjct 6171 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 6112
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| || |||||||||| |||||| ||| | |||| | | || || |||| ||
Sbjct 6111 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCTC---TC 6056
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | ||||| || || || |||||||| || ||||| || |||||
Sbjct 6055 GACCTCGAGTGTGATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005
Score = 91.5 bits (100), Expect = 1e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| ||||| ||||| | | ||| || | || || |||||||| || || ||
Sbjct 5684 CTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 5625
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | ||||| | |||||||||| |||||| ||| | ||
Sbjct 5624 GATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 5566
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | || ||||| || || ||||| | ||||| ||||| || ||
Sbjct 5565 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTTGCCAGT 5517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792151825560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |