Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 6e-14 seq1 93.3 6e-14 >seq5 Length=559289 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 |||||||||||| || || ||||| || | | || | ||||| || || || || Sbjct 31943 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGG 31884 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| || |||||||| || ||||| || |||| || || || ||||| |||||| Sbjct 31883 CCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAG 31824 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || || || ||||| || Sbjct 31823 ATACCCTCGACAGCGGCGAAGGCAACCAG 31795 >seq1 Length=1003528 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 |||||||||||| || || ||||| || | | || | ||||| || || || || Sbjct 973701 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGG 973642 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| || |||||||| || ||||| || |||| || || || ||||| |||||| Sbjct 973641 CCAGGCATCAGGCCACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAG 973582 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || || || ||||| || Sbjct 973581 ATACCCTCGACAGCGGCGAAGGCAACCAG 973553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906593305480