Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq102 87.8 6e-12 seq3 87.8 6e-12 seq5 86.0 2e-11 seq1 86.0 2e-11 >seq102 Length=78597 Score = 87.8 bits (96), Expect = 6e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 ||| ||| | || ||| | |||||||| |||||| || ||||| || || || || || Sbjct 3973 CGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATGTTGACCAGGGTGG 3914 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 ||| ||||| || || || |||||||||||||||||||||||||||| Sbjct 3913 TAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGA 3863 >seq3 Length=875381 Score = 87.8 bits (96), Expect = 6e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 ||| ||| | || ||| | |||||||| |||||| || ||||| || || || || || Sbjct 871424 CGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATGTTGACCAGGGTGG 871483 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 ||| ||||| || || || |||||||||||||||||||||||||||| Sbjct 871484 TAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGA 871534 >seq5 Length=559289 Score = 86.0 bits (94), Expect = 2e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817 || ||||||||||||||| | || |||||||| || |||| || ||||| || ||| Sbjct 31840 TTCGCCTCCATCTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAAC 31899 Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 || |||||| ||| ||||||||| | || |||||||||||||| || Sbjct 31900 GAGCTGATCTCTCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCT 31949 >seq1 Length=1003528 Score = 86.0 bits (94), Expect = 2e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817 || ||||||||||||||| | || |||||||| || |||| || ||||| || ||| Sbjct 973598 TTCGCCTCCATCTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAAC 973657 Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 || |||||| ||| ||||||||| | || |||||||||||||| || Sbjct 973658 GAGCTGATCTCTCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCT 973707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588330769907365