Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq102 87.8 6e-12
seq3 87.8 6e-12
seq5 86.0 2e-11
seq1 86.0 2e-11
>seq102
Length=78597
Score = 87.8 bits (96), Expect = 6e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
||| ||| | || ||| | |||||||| |||||| || ||||| || || || || ||
Sbjct 3973 CGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATGTTGACCAGGGTGG 3914
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
||| ||||| || || || ||||||||||||||||||||||||||||
Sbjct 3913 TAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGA 3863
>seq3
Length=875381
Score = 87.8 bits (96), Expect = 6e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
||| ||| | || ||| | |||||||| |||||| || ||||| || || || || ||
Sbjct 871424 CGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCCCGCTATGTTGACCAGGGTGG 871483
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
||| ||||| || || || ||||||||||||||||||||||||||||
Sbjct 871484 TAACAAGCGCCCTGGCGCTTTTGCCATCTACCTGGAGCCGTGGCACGCCGA 871534
>seq5
Length=559289
Score = 86.0 bits (94), Expect = 2e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817
|| ||||||||||||||| | || |||||||| || |||| || ||||| || |||
Sbjct 31840 TTCGCCTCCATCTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAAC 31899
Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
|| |||||| ||| ||||||||| | || |||||||||||||| ||
Sbjct 31900 GAGCTGATCTCTCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCT 31949
>seq1
Length=1003528
Score = 86.0 bits (94), Expect = 2e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817
|| ||||||||||||||| | || |||||||| || |||| || ||||| || |||
Sbjct 973598 TTCGCCTCCATCTTCTGGCTTAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCCAAC 973657
Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
|| |||||| ||| ||||||||| | || |||||||||||||| ||
Sbjct 973658 GAGCTGATCTCTCGTGACGAGGGTCTCCACACTGACTTCGCCTGTCTGCT 973707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588330769907365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |