Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq102 275 8e-69 seq3 275 8e-69 seq5 84.2 3e-11 seq1 84.2 3e-11 >seq102 Length=78597 Score = 275 bits (304), Expect = 8e-69 Identities = 588/872 (67%), Gaps = 15/872 (2%) Strand=Plus/Plus Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 ||||| | || ||||||| || |||| ||||| |||||| |||||| | || Sbjct 3419 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 3478 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340 ||||| | ||| || || || | |||||| || ||| || |||| ||||| |||||| Sbjct 3479 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 3538 Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400 |||||||||||||| |||||||||||||||||| |||| | || ||||| ||||| | Sbjct 3539 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 3598 Query 111401 TTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCG 111458 | |||||| || | ||| | | || | | | || || | ||| | | || |||||| Sbjct 3599 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCG--GCCACGGCCCTCCT 3656 Query 111459 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 111518 ||||||||| | |||||| || || ||||| ||||| | || | || || || | Sbjct 3657 GCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGG 3716 Query 111519 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGT 111578 ||| || |||||||| || | ||| | ||| ||||||| ||||||||||| || | Sbjct 3717 CCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGAT 3776 Query 111579 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 111638 | ||| |||||| | | ||||| || | ||| |||| || | ||| ||||| Sbjct 3777 CGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCT 3836 Query 111639 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698 || | ||||||||||| | || ||| |||||||| ||||| || |||| || | || Sbjct 3837 TCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAG 3896 Query 111699 ATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 111752 || ||| | ||| | || | |||||||| || ||| |||||| || | Sbjct 3897 CGCCAGGGCGCTTGTTA---CCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 3953 Query 111753 GAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGG 111812 | ||||| |||| |||||| | || || || || || | ||| || | | Sbjct 3954 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 4013 Query 111813 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACT 111872 | | | |||| || || || ||||| ||||| ||| ||||| ||||| Sbjct 4014 CGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGG 4073 Query 111873 CCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAAC 111932 | | ||||| |||||||||| | || ||| | | | | | ||||||||| Sbjct 4074 TCTTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAG 4133 Query 111933 TGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA 111992 | | ||| || || ||| | |||||||| | || || | |||||| |||| Sbjct 4134 ATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA-G 4192 Query 111993 TACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 112051 ||| | ||||||||| || ||||||||| | | | |||||||| || ||||| || Sbjct 4193 TACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATT 4252 Query 112052 CCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||| || || ||||||| || || ||| || Sbjct 4253 CCGACGGCAACACGCATGAGCAAGTGCTGAGG 4284 >seq3 Length=875381 Score = 275 bits (304), Expect = 8e-69 Identities = 588/872 (67%), Gaps = 15/872 (2%) Strand=Plus/Minus Query 111221 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 111280 ||||| | || ||||||| || |||| ||||| |||||| |||||| | || Sbjct 871978 ACATAAGTGGGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTG 871919 Query 111281 TACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 111340 ||||| | ||| || || || | |||||| || ||| || |||| ||||| |||||| Sbjct 871918 TACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTA 871859 Query 111341 CTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAT 111400 |||||||||||||| |||||||||||||||||| |||| | || ||||| ||||| | Sbjct 871858 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCC 871799 Query 111401 TTGAGAATAGCCTTCCA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCG 111458 | |||||| || | ||| | | || | | | || || | ||| | | || |||||| Sbjct 871798 TCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCG--GCCACGGCCCTCCT 871741 Query 111459 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 111518 ||||||||| | |||||| || || ||||| ||||| | || | || || || | Sbjct 871740 GCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATCAGCCAGGCCGGGGG 871681 Query 111519 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGT 111578 ||| || |||||||| || | ||| | ||| ||||||| ||||||||||| || | Sbjct 871680 CCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATGAAGAGAT 871621 Query 111579 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 111638 | ||| |||||| | | ||||| || | ||| |||| || | ||| ||||| Sbjct 871620 CGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCT 871561 Query 111639 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698 || | ||||||||||| | || ||| |||||||| ||||| || |||| || | || Sbjct 871560 TCCGCAGATCAAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAAG 871501 Query 111699 ATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 111752 || ||| | ||| | || | |||||||| || ||| |||||| || | Sbjct 871500 CGCCAGGGCGCTTGTTA---CCACCCTGGTCAACATAGCGGGCGGTGTTGTTAAACACAC 871444 Query 111753 GAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGG 111812 | ||||| |||| |||||| | || || || || || | ||| || | | Sbjct 871443 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTACGAACCGGTAG 871384 Query 111813 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACT 111872 | | | |||| || || || ||||| ||||| ||| ||||| ||||| Sbjct 871383 CGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCACAGG 871324 Query 111873 CCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAAC 111932 | | ||||| |||||||||| | || ||| | | | | | ||||||||| Sbjct 871323 TCTTGAGAGTGTCATAGATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAG 871264 Query 111933 TGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA 111992 | | ||| || || ||| | |||||||| | || || | |||||| |||| Sbjct 871263 ATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGAGTGAA-G 871205 Query 111993 TACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 112051 ||| | ||||||||| || ||||||||| | | | |||||||| || ||||| || Sbjct 871204 TACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATT 871145 Query 112052 CCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||| || || ||||||| || || ||| || Sbjct 871144 CCGACGGCAACACGCATGAGCAAGTGCTGAGG 871113 >seq5 Length=559289 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || ||||| || || ||||| || || Sbjct 31929 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCC 31870 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | | |||||| || ||||||||||||||||| ||| Sbjct 31869 ACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 31810 Query 122790 CGCAAACGCAA 122800 || || |||| Sbjct 31809 GGCGAAGGCAA 31799 >seq1 Length=1003528 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || ||||| || || ||||| || || Sbjct 973687 GTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTCAGGCCAGGCATCAGGCC 973628 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | | |||||| || ||||||||||||||||| ||| Sbjct 973627 ACGCTTCTTAAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 973568 Query 122790 CGCAAACGCAA 122800 || || |||| Sbjct 973567 GGCGAAGGCAA 973557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029982447200