Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq25 203 1e-46 seq142 136 1e-26 seq87 136 1e-26 seq43 114 4e-20 seq37 100 9e-16 >seq25 Length=240845 Score = 203 bits (224), Expect = 1e-46 Identities = 926/1456 (64%), Gaps = 27/1456 (2%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | || || ||| | || || || || || ||||| | ||| | | |||| | Sbjct 193067 CCGCCGTCGGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGCGATGACC 193126 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | || || || || | ||| | || | Sbjct 193127 GCATTGAAATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCA 193186 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || |||| || || || | | Sbjct 193187 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACA 193246 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTT------TTCTGACAAATCTA 349430 | || || || ||||||||||| || |||||| | | || | |||| || Sbjct 193247 ACACTGTCTTCGATGCTAAGCGTCTCATTGGTCGCCGCTTCCAGGATGCTGAGG--TC-- 193302 Query 349431 CACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAA 349490 || | ||| | || || | ||||| | | | || | ||| | | || || Sbjct 193303 --CAGGCCGATATGAAGCACTGGCCTTTCAA-GATCATCGAGAAGGC--TACCAAGCCCG 193357 Query 349491 TTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAA 349550 | || ||| |||| | || ||||| || || || || || || || || | | Sbjct 193358 TCATCGAGATTGAGTTCAAGGGTGAGGCCAAGCAGTTCACCCCTGAGGAGATCTCCGCCA 193417 Query 349551 TGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATG 349610 || | | || || ||| || | || || || || | |||| || || | | | Sbjct 193418 TGATCCTCGTCAAGATGCGTGAGACCGCCGAGGCTTACCTCGGTGGCACCGTCAACAACG 193477 Query 349611 CTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTG 349670 |||| || ||||| || ||||| || || || | |||||| || || || || || | Sbjct 193478 CTGTCATCACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCG 193537 Query 349671 GCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTG 349730 | |||||| || | || || || | || ||||| || |||||||| || || |||| Sbjct 193538 GTCTCATTGCCGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACTGCCGCTGCCATTG 193597 Query 349731 CATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTG 349790 | || || ||||| || | | || || || | || || || ||| | |||| Sbjct 193598 CCTACGGTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTTGGTG 193657 Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850 |||||||||| ||||| || || || || | || ||||| || || || ||||| || | Sbjct 193658 GTGGTACTTTCGATGTTTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTTAAGGCCA 193717 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910 |||||||||| || || | ||||| || || || || || ||||| || || || | Sbjct 193718 CTGCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCG 193777 Query 349911 TTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969 | || || || ||||| ||||| || | ||| | || || | || | ||| Sbjct 193778 TCAACGAGTTCAAGCG-CAAGCACAAGAAGGATCTCACCACCAACGCTCGTGCTCTCCGT 193836 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || | || || || || ||||| |||||| || | || || || | || ||||| Sbjct 193837 CGTCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCTCAGACCTCC 193896 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 || || ||||| ||||| || || || |||| | || || || ||||| || Sbjct 193897 ATCGAGATTGACTCTCTCTTCGAGGGTGTTGACTTCTACACCTCCATCACCCGTGCCCGT 193956 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 || ||||| | || |||||| || | | || ||||| || || || || | Sbjct 193957 TTCGAAGAGCTCTGCCAGGATCTCTTCCGCGGCACCATGGAGCCCGTTGAGCGTGTCCTC 194016 Query 350150 AAAGATG-CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 || | ||| | || | | || | || | || | || | || ||||||||||| Sbjct 194017 CGTGACGCCAAGATTGACAAGTCCTCCG-TTCACGAGATTGTCCTCGTCGGTGGTTCTAC 194075 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA-ACCTTCTA 350267 ||||| || || | || || | | || || || || || ||| || || | | Sbjct 194076 CCGTATCCCCAAGATCCAGAAGCTTGTCTCCGACTTCTTCAA---CAAGGACGCCAACAA 194132 Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTAT 350327 | || || || || ||||| || ||||| || ||||| || || ||||| |||| | | Sbjct 194133 G-TCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGCTATCCTGT 194191 Query 350328 CTGGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTT 350384 | || | || ||| || | | || | | || || ||||| |||| |||| Sbjct 194192 CCGGTGACCAGTCTTCCAAGTCCACCAACGAGATCCTGCTTCTCGATGTCGCTCCTCTTT 194251 Query 350385 CGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTG 350444 | || || | || || | |||| || |||||| | | || | || | || Sbjct 194252 CCCTCGGTATTGAGACCGCCGGTGGTGTCATGACTCCTTTGATCAAGCGCAACACCACCA 194311 Query 350445 TACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAA 350504 | ||||| || |||||| | || || || || | | || || ||||| | || | Sbjct 194312 TCCCTACCAAGAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCCTGA 194371 Query 350505 TTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTA 350564 | || || || || ||||| ||||| ||||| || || || || || ||| | || Sbjct 194372 TCCAGGTCTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTCCTCGGAAAGTTCG 194431 Query 350565 CCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATA 350624 || | || ||||| || || | || ||||| ||| |||| ||| | |||||| Sbjct 194432 AGCTCACTGGCATTCCCCCCGCCCCCCGTGGTGTTCCCCAGGTTGAGGTCACCTTCGATG 194491 Query 350625 TTGATTCAAATGGTAT 350640 ||||| | || ||||| Sbjct 194492 TTGATGCCAACGGTAT 194507 >seq142 Length=51707 Score = 136 bits (150), Expect = 1e-26 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||||| | || ||||| ||||| || ||||| || |||||||||| Sbjct 45697 TTTGCATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTAT 45756 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || || || || ||||| ||||| ||||||||||| | Sbjct 45757 AGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGT 45816 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || || ||||| || || | || || || ||||| | ||| || Sbjct 45817 CGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGC 45876 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || || | |||||||| ||||| || || || Sbjct 45877 TCTCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAAC 45919 Score = 123 bits (136), Expect = 8e-23 Identities = 147/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || || || || ||||| ||||| ||||| || |||| Sbjct 45981 TTTGCATACCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTAT 46040 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || ||||| ||||| || || ||||| ||||| ||||| ||||| | Sbjct 46041 AATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGT 46100 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| || || || ||||| || || | || || || || || | ||| | || Sbjct 46101 CAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATC-GCTG 46159 Query 140683 G-TTCAACTTCAAGTGT 140698 | ||||| ||||| || Sbjct 46160 GACTCAACCTCAAGGGT 46176 >seq87 Length=93243 Score = 136 bits (150), Expect = 1e-26 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||||| | || ||||| ||||| || ||||| || |||||||||| Sbjct 6011 TTTGCATACCACCACGTAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTAT 5952 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || || || || ||||| ||||| ||||||||||| | Sbjct 5951 AGTCCGAGAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGT 5892 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || || ||||| || || | || || || ||||| | ||| || Sbjct 5891 CGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGC 5832 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || || | |||||||| ||||| || || || Sbjct 5831 TCTCGACCTCGAGGGTGATAGTCTTTCCAGTTAGGGTCTTAAC 5789 Score = 123 bits (136), Expect = 8e-23 Identities = 147/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || || || || ||||| ||||| ||||| || |||| Sbjct 5727 TTTGCATACCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTAT 5668 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || ||||| ||||| || || ||||| ||||| ||||| ||||| | Sbjct 5667 AATCCGAAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGT 5608 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| || || || ||||| || || | || || || || || | ||| | || Sbjct 5607 CAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTATC-GCTG 5549 Query 140683 G-TTCAACTTCAAGTGT 140698 | ||||| ||||| || Sbjct 5548 GACTCAACCTCAAGGGT 5532 >seq43 Length=296170 Score = 114 bits (126), Expect = 4e-20 Identities = 103/129 (80%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||| |||||| | || || ||| || |||| ||||||||||||||||| || || Sbjct 222777 CGTGGAACACCAAGCGTGACGTTC---TTGGATGACACACCAGCAAAGTGGAAGGTGTTC 222833 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | |||||| | |||||||||||| ||||| || |||| |||||| |||||||| Sbjct 222834 AGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGAACGCCGACCATTTCA 222893 Query 377578 CCAGGATTG 377586 ||||| ||| Sbjct 222894 CCAGGGTTG 222902 Score = 96.9 bits (106), Expect = 1e-14 Identities = 169/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| ||| || || || |||||||| | ||| |||||||| |||| Sbjct 223566 ATGTAACCAGTTTCGGCAGTCTTGACAGCGGTATCAATCAGACCTTCACGACCAGCCATG 223625 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 || |||||||| || ||||||||||| | ||||| | |||| |||| | ||||| Sbjct 223626 GCGTGGAAGAAGAACTCAGTAGGAGTCAATCCACGGAGGTATGAGTTCTCGACGAATCCA 223685 Query 378352 CTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCA 378411 | | | || |||| ||||| || || | ||||| | || |||| || || || Sbjct 223686 CGGGACTCGGGAGAATAATCATCCTTGGTGAAGTGAGGAAGGGTGCGATACTTGAAGCCG 223745 Query 378412 TATGGAATTCGTTTTCCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCA 378468 | ||||| || || || || || |||||| | |||| |||| ||| || | | Sbjct 223746 AACGGAATACGCTTGCCTTCCACGGACTGTTGTCCGACAAGGGCAG---TCATCTGCGAA 223802 Query 378469 ATATT 378473 ||||| Sbjct 223803 ATATT 223807 >seq37 Length=243779 Score = 100 bits (110), Expect = 9e-16 Identities = 221/328 (67%), Gaps = 5/328 (2%) Strand=Plus/Minus Query 349561 TAAAATGAAGGAAATTGCTGA-AGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 ||| |||||||| ||||| || ||| | || || | || || || | || ||| ||| Sbjct 33295 TAAGATGAAGGAGATTGCCGAGAGCTTCTTG-GGCAAGACTGTCACCCACGCCGTTGTTA 33237 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 | || || ||||| || | || ||||||||| || || || ||||| || | ||| | Sbjct 33236 CCGTTCCCGCCTACTTCAGCGACGCCCAGCGTCAGGCTACCAAGGATGCCGGTACCATCG 33177 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 | || | || || || | | | || || ||||| || || || || || || || | Sbjct 33176 CCGGTCTCAACGTCCTCCGTGTTGTCAACGAGCCCACCGCCGCCGCTATCGCCTACGGTC 33117 Query 349740 TTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 ||||||| | ||||| || | | || ||| ||| | ||||||||||| | Sbjct 33116 TTGATAAGACCGGTGAC---GAGCGCCAGGTCATTGTTTACGATCTTGGTGGTGGTACCT 33060 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 | ||||| || || || | |||| | || |||| || ||| || || ||||||| Sbjct 33059 TCGATGTGTCTCTTCTGTCTATTGACAACGGCGTTTTCGAGGTTCTCGCTACCGCTGGTG 33000 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGA 349887 | || || |||||||| || ||||| || Sbjct 32999 ACACTCACCTTGGTGGTGAGGATTTCGA 32972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249410551371