Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq142 185 2e-41
seq87 185 2e-41
seq86 122 2e-22
seq102 120 7e-22
seq3 120 7e-22
seq23 111 4e-19
>seq142
Length=51707
Score = 185 bits (204), Expect = 2e-41
Identities = 161/200 (81%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||| |||||||| || || || ||||| |||| || || | ||| ||
Sbjct 45720 AGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCC 45779
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || ||||||||||| ||||| ||||| || |||| || |||||||||
Sbjct 45780 TCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 45839
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || ||||| || ||||| || |||||||| ||||| |||
Sbjct 45840 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTC 45899
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
||||| || || ||||| ||
Sbjct 45900 TTTCCAGTTAGGGTCTTAAC 45919
Score = 183 bits (202), Expect = 7e-41
Identities = 166/209 (79%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| ||||| ||||||||||| || ||||| ||||| |||| || || | ||| || |||
Sbjct 45495 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 45554
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
|||||||| || ||||||||||| || || ||||| || |||| || ||||||||||||
Sbjct 45555 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 45614
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| || ||||| || ||||| || ||||| || |||||||| ||||| ||||||
Sbjct 45615 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 45674
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | |||||| ||||| | |||||
Sbjct 45675 CCTGTCAAAGTCTTGACAAAGATTTGCAT 45703
Score = 181 bits (200), Expect = 2e-40
Identities = 154/190 (81%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| ||||||||||| ||||||||||||||||||| |||||| | |||||
Sbjct 46004 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 46063
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||||||||| || || ||||||||||||| || |||||||||
Sbjct 46064 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 46123
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| || || | |||||||| || ||||| ||
Sbjct 46124 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 46183
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 46184 TTGCCAGTGA 46193
>seq87
Length=93243
Score = 185 bits (204), Expect = 2e-41
Identities = 161/200 (81%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||| |||||||| || || || ||||| |||| || || | ||| ||
Sbjct 5988 AGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTCC 5929
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || ||||||||||| ||||| ||||| || |||| || |||||||||
Sbjct 5928 TCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 5869
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || ||||| || ||||| || |||||||| ||||| |||
Sbjct 5868 TGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGTC 5809
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
||||| || || ||||| ||
Sbjct 5808 TTTCCAGTTAGGGTCTTAAC 5789
Score = 183 bits (202), Expect = 7e-41
Identities = 166/209 (79%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| ||||| ||||||||||| || ||||| ||||| |||| || || | ||| || |||
Sbjct 6213 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 6154
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
|||||||| || ||||||||||| || || ||||| || |||| || ||||||||||||
Sbjct 6153 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 6094
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| || ||||| || ||||| || ||||| || |||||||| ||||| ||||||
Sbjct 6093 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 6034
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | |||||| ||||| | |||||
Sbjct 6033 CCTGTCAAAGTCTTGACAAAGATTTGCAT 6005
Score = 181 bits (200), Expect = 2e-40
Identities = 154/190 (81%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| ||||||||||| ||||||||||||||||||| |||||| | |||||
Sbjct 5704 AGGACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCC 5645
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||||||||| || || ||||||||||||| || |||||||||
Sbjct 5644 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 5585
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| || || | |||||||| || ||||| ||
Sbjct 5584 TGGATCTTGGACTTGACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTT 5525
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 5524 TTGCCAGTGA 5515
>seq86
Length=94082
Score = 122 bits (134), Expect = 2e-22
Identities = 137/182 (75%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || ||||| | ||||| || |||||||| || ||||||||
Sbjct 12374 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 12433
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || |||||||| |||| || ||||| ||||||||||| || ||||| |||
Sbjct 12434 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 12493
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 12494 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 12550
Query 211104 AA 211105
||
Sbjct 12551 AA 12552
>seq102
Length=78597
Score = 120 bits (132), Expect = 7e-22
Identities = 193/276 (70%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||| ||||| || ||| ||||| ||||| |||||||| | ||
Sbjct 3526 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 3582
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| |||||| |||||||| | ||| |||| ||| || || ||||||
Sbjct 3583 AGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCG 3642
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| | || || | ||||||||| |||||| | ||||| || || ||||||||
Sbjct 3643 GCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATC 3702
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| | || ||||| ||||| ||||| |||||||| |||| | ||||| ||| || ||
Sbjct 3703 AGCCAGGCCGGGGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCG 3762
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
||||||||||| || | ||||| | || |||||
Sbjct 3763 CTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAA 3798
>seq3
Length=875381
Score = 120 bits (132), Expect = 7e-22
Identities = 193/276 (70%), Gaps = 6/276 (2%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||| ||||| || ||| ||||| ||||| |||||||| | ||
Sbjct 871871 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 871815
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| |||||| |||||||| | ||| |||| ||| || || ||||||
Sbjct 871814 AGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATAGTCTTGCG 871755
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| | || || | ||||||||| |||||| | ||||| || || ||||||||
Sbjct 871754 GCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCGTCGAACTCATCACCGTAGACATC 871695
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| | || ||||| ||||| ||||| |||||||| |||| | ||||| ||| || ||
Sbjct 871694 AGCCAGGCCGGGGGCCTCGTTGGGACAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCG 871635
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
||||||||||| || | ||||| | || |||||
Sbjct 871634 CTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAA 871599
>seq23
Length=393977
Score = 111 bits (122), Expect = 4e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| || ||||| || |||||||| ||||||| || || | |||||
Sbjct 298327 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 298386
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| ||||| || |||||||| || | || ||||||||
Sbjct 298387 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 298445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159148183129805
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |