Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq142 109 5e-19
seq87 109 5e-19
>seq142
Length=51707
Score = 109 bits (120), Expect = 5e-19
Identities = 158/219 (72%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| ||||||| || || ||| ||| || || |||||||| || | || || ||| ||
Sbjct 45489 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 45548
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| || ||||| || || || || ||||||||||||||||||| ||| | || ||| |||
Sbjct 45549 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 45608
Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245
||| ||| || |||| ||| | | | ||||| ||| ||| || || | ||
Sbjct 45609 TCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCT---CTCGACCTCGAGTGT 45664
Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| | ||||| |||| || || ||||||||||||||
Sbjct 45665 GATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 45703
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || ||| ||| ||||| || |||||||| | ||| || || | || |||
Sbjct 46007 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 46066
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| || || ||||||||||||||||| | || | | ||| |||||| |
Sbjct 46067 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 46126
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| ||| | | | |||||||| ||||| || || | ||||| ||||
Sbjct 46127 ATCTTGGACTTGA-CGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTT 46185
Query 39255 TCCCGT 39260
|| ||
Sbjct 46186 GCCAGT 46191
>seq87
Length=93243
Score = 109 bits (120), Expect = 5e-19
Identities = 158/219 (72%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| ||||||| || || ||| ||| || || |||||||| || | || || ||| ||
Sbjct 6219 CGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCG 6160
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| || ||||| || || || || ||||||||||||||||||| ||| | || ||| |||
Sbjct 6159 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTG 6100
Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGT 39245
||| ||| || |||| ||| | | | ||||| ||| ||| || || | ||
Sbjct 6099 TCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCTGAGCT---CTCGACCTCGAGTGT 6044
Query 39246 GATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| | ||||| |||| || || ||||||||||||||
Sbjct 6043 GATGGTCTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 6005
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || ||| ||| ||||| || |||||||| | ||| || || | || |||
Sbjct 5701 ACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCCGAAAGGGTGCGACCATCCTCA 5642
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| || || ||||||||||||||||| | || | | ||| |||||| |
Sbjct 5641 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGG 5582
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| ||| | | | |||||||| ||||| || || | ||||| ||||
Sbjct 5581 ATCTTGGACTTGA-CGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTTTT 5523
Query 39255 TCCCGT 39260
|| ||
Sbjct 5522 GCCAGT 5517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429544254582641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |