Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07]
257 sequences; 35,046,070 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq142 87.8 4e-12
seq87 87.8 4e-12
seq23 84.2 5e-11
>seq142
Length=51707
Score = 87.8 bits (96), Expect = 4e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| ||||| || ||||| || || || || || || | | ||| | || ||
Sbjct 45719 GAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTC 45778
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||||||||| | |||||||| | | || || ||||| ||
Sbjct 45779 CTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTC 45838
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | | ||||| ||||| || || || || |||||
Sbjct 45839 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGT 45898
Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094
|| || || || ||||| ||||
Sbjct 45899 CTTTCCAGTTAGGGTCTTAACGA 45921
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| || || ||||| ||||| || ||||| || || || | | ||| | || || ||
Sbjct 45495 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 45554
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| || || ||||||||||| | ||||||||| | | || || ||||| || ||
Sbjct 45555 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 45614
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||||| | || | | | ||||| ||||| || || || || || || ||
Sbjct 45615 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 45674
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | |||||| || |||| |||||
Sbjct 45675 CCTGTCAAAGTCTTGACAAAGATTTGCAT 45703
>seq87
Length=93243
Score = 87.8 bits (96), Expect = 4e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| ||||| || ||||| || || || || || || | | ||| | || ||
Sbjct 5989 GAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTC 5930
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||||||||| | |||||||| | | || || ||||| ||
Sbjct 5929 CTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTC 5870
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | | ||||| ||||| || || || || |||||
Sbjct 5869 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGT 5810
Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094
|| || || || ||||| ||||
Sbjct 5809 CTTTCCAGTTAGGGTCTTAACGA 5787
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| || || ||||| ||||| || ||||| || || || | | ||| | || || ||
Sbjct 6213 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 6154
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| || || ||||||||||| | ||||||||| | | || || ||||| || ||
Sbjct 6153 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 6094
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||||| | || | | | ||||| ||||| || || || || || || ||
Sbjct 6093 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 6034
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | |||||| || |||| |||||
Sbjct 6033 CCTGTCAAAGTCTTGACAAAGATTTGCAT 6005
>seq23
Length=393977
Score = 84.2 bits (92), Expect = 5e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || ||||| || ||||| || |||||||||||||| | | ||| | |||||
Sbjct 298326 GAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATC 298385
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 298386 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 298445
Query 152012 T 152012
|
Sbjct 298446 T 298446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153817000684447
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |