Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq142 87.8 4e-12 seq87 87.8 4e-12 seq23 84.2 5e-11 >seq142 Length=51707 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| ||||| || ||||| || || || || || || | | ||| | || || Sbjct 45719 GAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTC 45778 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || ||||||||||| | |||||||| | | || || ||||| || Sbjct 45779 CTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTC 45838 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | | ||||| ||||| || || || || ||||| Sbjct 45839 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGT 45898 Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094 || || || || ||||| |||| Sbjct 45899 CTTTCCAGTTAGGGTCTTAACGA 45921 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || || ||||| ||||| || ||||| || || || | | ||| | || || || Sbjct 45495 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 45554 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || ||||||||||| | ||||||||| | | || || ||||| || || Sbjct 45555 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 45614 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||||| | || | | | ||||| ||||| || || || || || || || Sbjct 45615 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 45674 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| || |||| ||||| Sbjct 45675 CCTGTCAAAGTCTTGACAAAGATTTGCAT 45703 >seq87 Length=93243 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| ||||| || ||||| || || || || || || | | ||| | || || Sbjct 5989 GAGGACAAGGTGAAGTGTGGACTCCTTCTGAATATTATAGTCCGAGAGAGTACGTCCGTC 5930 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || ||||||||||| | |||||||| | | || || ||||| || Sbjct 5929 CTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTC 5870 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | | ||||| ||||| || || || || ||||| Sbjct 5869 CTGGATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGGGTGATAGT 5810 Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094 || || || || ||||| |||| Sbjct 5809 CTTTCCAGTTAGGGTCTTAACGA 5787 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || || ||||| ||||| || ||||| || || || | | ||| | || || || Sbjct 6213 ACCAGGTGGAGAGTGGACTCCTTCTGGATATTATAGTCCGAGAGAGTACGTCCGTCCTCC 6154 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || ||||||||||| | ||||||||| | | || || ||||| || || Sbjct 6153 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 6094 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||||| | || | | | ||||| ||||| || || || || || || || Sbjct 6093 ATCTTGGACTTGACGTTGTCAATGGTATCTGAGCTCTCGACCTCGAGTGTGATGGTCTTT 6034 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||| || |||| ||||| Sbjct 6033 CCTGTCAAAGTCTTGACAAAGATTTGCAT 6005 >seq23 Length=393977 Score = 84.2 bits (92), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || ||||| || ||||| || |||||||||||||| | | ||| | ||||| Sbjct 298326 GAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATC 298385 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||| | | ||| || ||||| || Sbjct 298386 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 298445 Query 152012 T 152012 | Sbjct 298446 T 298446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153817000684447