Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq142 156 1e-32 seq87 156 1e-32 seq86 114 3e-20 seq23 87.8 4e-12 >seq142 Length=51707 Score = 156 bits (172), Expect = 1e-32 Identities = 154/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || |||||||||||||| || |||||||| ||||| | Sbjct 45921 TCGTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTG 45862 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| ||||| |||||||| || || || || || ||||||||||| |||| Sbjct 45861 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTA 45802 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| || || ||||| || || ||| | ||||| | || ||||| | || || | Sbjct 45801 TCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATTCAGAAGG 45742 Query 178111 AATCAACACTGCATCTTGT 178129 | || ||||| || ||||| Sbjct 45741 AGTCCACACTTCACCTTGT 45723 Score = 154 bits (170), Expect = 4e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | |||||||| || ||||| |||||||| || |||||||| Sbjct 45700 CAAATCTTTGTCAAGACTTTGACAGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 45641 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || || || |||||||| Sbjct 45640 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 45581 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| | ||||| | || ||||| || Sbjct 45580 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATC 45521 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 45520 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 45491 Score = 134 bits (148), Expect = 3e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || ||||| |||||||| ||||| || | || || ||||| |||||||| Sbjct 46193 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGT 46134 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || || ||||| |||||||| || ||||||||||| || | Sbjct 46133 CCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCA 46074 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || ||| | ||||||||| ||||||| || || || || | Sbjct 46073 AGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCC 46014 Query 178123 ATCTTGT 178129 | || || Sbjct 46013 ACCTGGT 46007 >seq87 Length=93243 Score = 156 bits (172), Expect = 1e-32 Identities = 154/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || |||||||||||||| || |||||||| ||||| | Sbjct 5787 TCGTTAAGACCCTAACTGGAAAGACTATCACCCTCGAGGTCGAGAGCTCAGATACCATTG 5846 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| ||||| |||||||| || || || || || ||||||||||| |||| Sbjct 5847 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTA 5906 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| || || ||||| || || ||| | ||||| | || ||||| | || || | Sbjct 5907 TCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATTCAGAAGG 5966 Query 178111 AATCAACACTGCATCTTGT 178129 | || ||||| || ||||| Sbjct 5967 AGTCCACACTTCACCTTGT 5985 Score = 154 bits (170), Expect = 4e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | |||||||| || ||||| |||||||| || |||||||| Sbjct 6008 CAAATCTTTGTCAAGACTTTGACAGGAAAGACCATCACACTCGAGGTCGAGAGCTCAGAT 6067 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || || || || |||||||| Sbjct 6068 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 6127 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| | ||||| | || ||||| || Sbjct 6128 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTATAATATC 6187 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 6188 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 6217 Score = 134 bits (148), Expect = 3e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || ||||| |||||||| ||||| || | || || ||||| |||||||| Sbjct 5515 TCACTGGCAAAACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTCAAGT 5574 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || || ||||| |||||||| || ||||||||||| || | Sbjct 5575 CCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCA 5634 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || ||| | ||||||||| ||||||| || || || || | Sbjct 5635 AGCAGCTTGAGGATGGTCGCACCCTTTCGGATTATAACATCCAAAAGGAGTCCACTCTCC 5694 Query 178123 ATCTTGT 178129 | || || Sbjct 5695 ACCTGGT 5701 >seq86 Length=94082 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 12553 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 12497 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| ||||| || || || || || || |||||||| || Sbjct 12496 CATCGACAACGTCAAGACCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCG 12437 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 12436 CCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 12377 Query 178106 AAA 178108 || Sbjct 12376 GAA 12374 >seq23 Length=393977 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || |||||||| || || ||||||||||| || |||||||| Sbjct 298445 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 298386 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | ||||| | ||||| ||| |||| || || || || || || || || Sbjct 298385 GATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 298330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727236338858